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|CLADE/SUBCLADE SYMBOLS: Added Renamed|
|SNP SYMBOLS: Not on 2005 tree Confirmed within subclade Provisional Private|
C RPS4Y (M130), M216
• C* -
• C1 M8, M105, M131
• C2 M38
• • C2* -
• • C2a P33
• • C2b M208
• C3 M217, P44
• • C3* -
• • C3a M93
• • C3b P39
• • C3c M48, M77, M86
• • C3d M407 (originally identified by discoverer as C3a2)
• C4 M347
• • C4* -
• • C4a DYS390.1 del
• • C4b M210
• C5 M356
New SNP not yet placed on tree
Note on the DYS390.1 deletion
The DYS390.1 deletion that characterizes haplogroup C4a is not a true SNP. DYS390 is a complex marker, and the deletion of four repeats from the first element of the marker is characteristic of the majority of tested M347 individuals.
Y-DNA haplogroup C appears to have arisen shortly after modern humans left Africa. The haplogroup can be traced across the southern Arabian Peninsula through Pakistan and India into Sri Lanka and Australia, and Southeast Asia.C* is found on the Indian subcontinent, Sri Lanka and in parts of SE Asia. The rare C1 lineage appears to be restricted to Japan. C2 is found predominantly in New Guinea, Melanesia, and Polynesia. The successful C3 lineage is believed to have originated in southeast or central Asia, spreading from there into northern Asia and the Americas. C3 is also found in low concentrations in eastern and central Europe, where it may represent evidence of the westward expansion of the Huns in the early middle ages. C4 is found exclusively among aboriginal Australians and is dominant in that population. C5 has a significant presence in India with a single instance known from Pakistan.
Capelli et al,
Population Structure in the Mediterranean Basin: A Y Chromosome Perspective. (pdf)
Annals of Human Genetics, 2005.
Cinnioglu et al, Excavating Y-chromosome Haplotype Strata in Anatolia. (pdf) Human Genetics. 114:127-148, 2004.
Deng et al, Evolution and Migration History of the Chinese Population Inferred from the Chinese Y-chromosome Evidence. (pdf) Journal of Human Genetics, 49:339-348, 2004.
Hammer et al, Dual Origins of the Japanese: Common Ground for Hunter-gatherer and Farmer Y Chromosomes. (abstract) Journal of Human Genetics, 51:47-58, 2006.
Hudjashov G, Peopling of Sahul: Evidence from mtDNA and Y-Chromosome. Thesis (M.SC.) University of Tartu, Estonia, 2006.
Karafet et al, Paternal Population History of East Asia: Sources, Patterns, and Microevolutionary Processes. (pdf) American Journal of Human Genetics, 69:615-628, 2001.
Kayser et al, Independent Histories of Human Y Chromosomes from Melanesia and Australia. American Journal of Human Genetics, 68:173-190, 2001.
Kayser et al, Melanesian and Asian Origins of Polynesians: mtDNA and Y-Chromosome Gradients across the Pacific. MBE Advance Access published August 21, 2006.
Kayser et al. Reduced Y-Chromosome, but Not Mitochrondrial DNA, Diversity in Human Populations from West New Guinea. American Journal of Human Genetics, 72:281-302, 2003.
Kivisild et al, The Genetic Heritage of the Earliest Settlers Persists in both Indian Tribal and Caste Populations. (pdf) American Journal of Human Genetics, 72:313-332, 2003.
Mohyuddin et al, Detection of Novel Y SNPs Provides Further Insights into Y Chromosomal Variation in Pakistan. Journal of Human Genetics, 2006.
Regueiro et al, Iran: Tricontinetnal Nexus for Y-Chromosome Driven Migration. (abstract) Human Heredity, Vol. 61, No 3, 132-143, 2006.
Scheinfeldt et al, Unexpected NRY Chromosome Variation in Northern Island Melanesia. (Link and comments from Dienekes' Anthropological Blog) Society for Molecular Biology, 2006.
Sengupta et al, Polarity and Temporality of High Resolution Y-chromosome Distributions in India Identify Both Indigenous and Exogenous Expansions and Reveal Minor Genetic Influence of Central Asian Pastoralists. (pdf) American Journal of Human Genetics, 78:202-221, 2006.
Ed Martin, C/C3 Haplogroup
Corrections/Additions made since 10 April 2006:
Contact Person for Haplogroup C: David Wilson
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