Y-DNA SNP Index - 2010
The entire work is identified by the Version Number and date given on the Main Page.   Directions for citing the document are given at the bottom of the Main Page.
Version History     Last revision date for this specific page: 4 December 2010
Email Alice Fairhurst if you find any broken links on this page.

aka = also known as

Disclaimer: The papers referenced here do not necessarily represent the first publication of some discoveries. In many cases, authors are including the work of others. In this document ISOGG in no way is trying to assign credit to researchers. Some of the earlier research papers have been omitted because they use older naming conventions that would require further explanation.
Links in the Haplogroup column lead to the haplogroup page to which the snp belongs. Links from RefSNP ID (aka rs numbers) leads to data from the National Center for Biotechnology Information (NCBI) website. Links from the Y-position numbers lead to the Family Tree Y-DNA Chromosome Browser designed by Thomas Krahn.

LINKS:  Main Page   Y-DNA Tree Trunk   Papers/Presentations Cited   Glossary   Listing Criteria

SNP Hapgroup Comments RefSNP ID; Y-position
002611 O3a4 aka IMS-JST002611; Nanaka et al (2007); Karafet et al (2008) rs2075181; 7606726
021354 O3a3 aka IMS-JST021354 and P201; Nanaka et al (2007); Karafet et al (2008) rs2267801; 2888196
021355 D aka IMS-JST021355; Nanaka et al (2007); Karafet et al (2008) rs2267802; 2888425
022454 O2b aka IMS-JST022454; Nanaka et al (2007); Karafet et al (2008) rs2268588; 22919969
022457 D2a1b aka IMS-JST022457; Nanaka et al (2007); Karafet et al (2008) rs2268591; 22873985
12f2.1 (12f2a) J Casanova et al (1985); Rosser et al (2000); Cruciani et al (2002); Semino et al (2002); YCC (2002); Butler (2003); Jobling et al (2003); Kivisild et al (2003); Behar et al (2004); Di Giaicomo et al (2004); Flores et al (2004); Semino et al (2004); Shen et al (2004); Alonso et al (2005); Capelli et al (2005); Hammer et al (2005); Hammer et al (2006); Karlsson et al (2006); Karafet et al (2008)    
12f2.2 (12f2b) D2 Underhill et al (2001); YCC (2002); Butler (2003); Jobling et al (2003); Hammer et al (2006); Karafet et al (2008)    
47z O2b1 Shinka et al (1999); YCC (2002); Butler (2003); Jobling et al (2003); Hammer et al (2006); Karafet et al (2008) 3496442
50f2/C K (notes) Schienfeldt et al (2006)    
50f2(P) B2b Jobling et al (1996); YCC (2002); Butler (2003); Jobling et al (2003); Karafet et al (2008) 21906455
92R7 P Hurles et al (1999); YCC (2002); Butler (2003); Jobling et al (2003); Flores et al (2004); Alonso et al (2005); Capelli et al (2005); Derenko et al (2006); Karlsson et al (2006); Karafet et al (2008) 6165720; 10364337
Apt H2 Pandya et al (1998); YCC (2002); Butler (2003); Jobling et al (2003); Sengupta et al (2006); Karafet et al (2008) 21905719
DYS257 O3a1 aka P27.2; Hammer et al (2001); Cruciani et al (2002); Shi et al (2005) rs9786896; 8679538; 8680377
DYS271 E1b1a aka M2, aka SY81; Seielstad et al (1994); Karafet et al (2008) rs9785941; 12606577
DYS391p E1b1 YCC (2002); Jobling et al (2003); Vallone et al (2004); Karafet et al (2008) 13122402
DYS413≤18 J2a4 Di Giacomo et al (2004); Regueiro et al (2006); Sengupta et al (2006); King et al (2008)    
DYS445≤7 J2a4h1a King et al (2008) lists as DYS445-6    
DYS455≤9 J2b2e Athey & Schrack (2008)    
DYS439 -null R1b1b2a1a1c aka L1 and S26; see John McEwan's L1 SNP (aka Null DYS439) 13025258
IMS-JST002611 O3a4 aka 002611; Nanaka et al (2007); Karafet et al (2008) rs2075181; 7606726
IMS-JST021354 O3a3 aka 021354 and P201; Nanaka et al (2007); Karafet et al (2008) rs2267801; 2888196
IMS-JST021355 D aka 021355; Nanaka et al (2007); Karafet et al (2008) rs2267802; 2888425
IMS-JST022454 O2b aka 022454; Nanaka et al (2007); Karafet et al (2008) rs2268588; 22919969
IMS-JST022457 D2a1b aka 022457; Nanaka et al (2007); Karafet et al (2008) rs2268591; 22873985
L1 R1b1b2a1a1c aka S26, aka Null DYS439; see John McEwan's L1 SNP (aka Null DYS439) 13025258
L2 R1b1b2a1a2d3 aka S139, SNP discovery and data documenting the phylogenetic position were privately communicated to the ISOGG Y-DNA Working Group. rs2566671; 5815550
L3 R (Private SNPs) SNP discovery and data documenting the phylogenetic position were privately communicated to the ISOGG Y-DNA Working Group. 20165926
L4 R1b1b2a1a2d4 aka S178; SNP discovery and data documenting the phylogenetic position were privately communicated to the ISOGG Y-DNA Working Group. 20199274
L5 R (Private SNPs) SNP discovery and data documenting the phylogenetic position were privately communicated to the ISOGG Y-DNA Working Group. 13329261
L6 R (Private SNPs) SNP discovery and data documenting the phylogenetic position were privately communicated to the ISOGG Y-DNA Working Group. 13329340
L7 R (Private SNPs) SNP discovery and data documenting the phylogenetic position were privately communicated to the ISOGG Y-DNA Working Group. 20616380
L8 R (Private SNPs) SNP discovery and data documenting the phylogenetic position were privately communicated to the ISOGG Y-DNA Working Group. 20616396
L9 R (Private SNPs) SNP discovery and data documenting the phylogenetic position were privately communicated to the ISOGG Y-DNA Working Group. 20616551
L10 R (Private SNPs) 10 bp insertion; SNP discovery and data documenting the phylogenetic position were privately communicated to the ISOGG Y-DNA Working Group. 20616712
L11 R1b1b2a1a aka S127; SNP discovery and data documenting the phylogenetic position were privately communicated to the ISOGG Y-DNA Working Group. rs9786076; 16353412
L12 R (Private SNPs) SNP discovery and data documenting the phylogenetic position were privately communicated to the ISOGG Y-DNA Working Group. 13540514
L13 G2a3b1a1a aka S131 and U13; SNP discovery and data documenting the phylogenetic position were privately communicated to the ISOGG Y-DNA Working Group; Sims et al (2009). rs9786706; 13208948
L14 G2a3a1 aka S130 and U16, SNP discovery and data documenting the phylogenetic position were privately communicated to the ISOGG Y-DNA Working Group; Sims et al (2009). rs35474563; 21327383
L15 IJK aka M523 and S137, SNP discovery and data documenting the phylogenetic position were privately communicated to the ISOGG Y-DNA Working Group; Charoni (2009). rs9786139; 6813519
L16 IJK aka M522 and S138, SNP discovery and data documenting the phylogenetic position were privately communicated to the ISOGG Y-DNA Working Group; Charoni 2009. rs9786714; 7233143
L17 E1b1b1a2c SNP discovery and data documenting the phylogenetic position were privately communicated to the ISOGG Y-DNA Working Group. 13006694
L18 E1b1b1a SNP discovery and data documenting the phylogenetic position were privately communicated to the ISOGG Y-DNA Working Group; found within E-M78. Upstream of E-V13/V36, E-V12, and E-V22. Relationship to E-V65 unknown. Possibly synonymous with M78. 13435883
L19 E1b1b1b2 SNP discovery and data documenting the phylogenetic position were privately communicated to the ISOGG Y-DNA Working Group. 12994604
L20 R1b1b2a1a2d3a aka S144, SNP discovery and data documenting the phylogenetic position were privately communicated to the ISOGG Y-DNA Working Group. rs7067305; 12741292
L21 R1b1b2a1a2f aka M529 and S145, SNP discovery and data documenting the phylogenetic position were privately communicated to the ISOGG Y-DNA Working Group; Myers et al (2010)./td> rs11799226; 14163822
L22 I1d aka S142; SNP discovery and data documenting the phylogenetic position were privately communicated to the ISOGG Y-DNA Working Group. rs34626372; 8636009
L23 R1b1b2a aka S141; SNP discovery and data documenting the phylogenetic position were privately communicated to the ISOGG Y-DNA Working Group. rs9785971; 6813511
L24 J2a4h SNP discovery and data documenting the phylogenetic position were privately communicated to the ISOGG Y-DNA Working Group; rs35248080; 12796528
L25 J2a4h1 SNP discovery and data documenting the phylogenetic position were privately communicated to the ISOGG Y-DNA Working Group; rs34534058; 17646216
L26 J2a4 aka S57; SNP discovery and data documenting the phylogenetic position were privately communicated to the ISOGG Y-DNA Working Group; rs34459399; 21352285
L27 J2a4 SNP discovery and data documenting the phylogenetic position were privately communicated to the ISOGG Y-DNA Working Group; rs34126399; 21431366
L29 E1b1b1c1a aka S159, SNP discovery and data documenting the phylogenetic position were privately communicated to the ISOGG Y-DNA Working Group. 15445475
L30 G2a3 aka S126, Athey et al (2008). rs34134567; 14114293
L31 G2a aka S149, SNP discovery and data documenting the phylogenetic position were privately communicated to the ISOGG Y-DNA Working Group. rs35617575; 12538148
L32 G2a3 aka S148 and U8; SNP discovery and data documenting the phylogenetic position were privately communicated to the ISOGG Y-DNA Working Group; Sims et al (2009). rs7892988; 13202247
L38 I2b2 aka S154, SNP discovery and data documenting the phylogenetic position were privately communicated to the ISOGG Y-DNA Working Group. rs7892889; 14177464
L39 I2b2 aka S155, SNP discovery and data documenting the phylogenetic position were privately communicated to the ISOGG Y-DNA Working Group. rs7893033; 14708445
L40 I2b2 aka S156, SNP discovery and data documenting the phylogenetic position were privately communicated to the ISOGG Y-DNA Working Group. rs7893103; 14711661
L42 G2a3b1a2a aka S146, SNP discovery and data documenting the phylogenetic position were privately communicated to the ISOGG Y-DNA Working Group. rs34334142; 15170153
L43 G2a3b1a2 aka S147, SNP discovery and data documenting the phylogenetic position were privately communicated to the ISOGG Y-DNA Working Group. rs35251548; 16446759
L44 R1b1b2a1a1d1a SNP discovery and data documenting the phylogenetic position were privately communicated to the ISOGG Y-DNA Working Group. rs34738655; 2952150
L45 R1b1b2a1a1d1a1 SNP discovery and data documenting the phylogenetic position were privately communicated to the ISOGG Y-DNA Working Group. rs35760092; 13625532
L46 R1b1b2a1a1d1a1 SNP discovery and data documenting the phylogenetic position were privately communicated to the ISOGG Y-DNA Working Group. rs13304625; 17586803
L47 R1b1b2a1a1d1 SNP discovery and data documenting the phylogenetic position were privately communicated to the ISOGG Y-DNA Working Group. rs34283263; 20637957
L48 R1b1b2a1a1d aka S162; SNP discovery and data documenting the phylogenetic position were privately communicated to the ISOGG Y-DNA Working Group. rs13303755; 22021585
L49 R1b1b2a SNP discovery and data documenting the phylogenetic position were privately communicated to the ISOGG Y-DNA Working Group. rs9786142; 2902212
L50 R (Private SNPs) aka S136, SNP discovery and data documenting the phylogenetic position were privately communicated to the ISOGG Y-DNA Working Group. 7012023
L51 R1b1b2a1 aka M412 and S167; SNP discovery and data documenting the phylogenetic position were privately communicated to the ISOGG Y-DNA Working Group; Myers et al (2010). rs9786140; 8562236
L52 R1b1b2a1a SNP discovery and data documenting the phylogenetic position were privately communicated to the ISOGG Y-DNA Working Group. rs13304168; 13151202
L53 Q1a3a SNP discovery and data documenting the phylogenetic position were privately communicated to the ISOGG Y-DNA Working Group. rs34724285,; 20101684
L54 Q1a3a SNP discovery and data documenting the phylogenetic position were privately communicated to the ISOGG Y-DNA Working Group. rs34954951,; 21702170
L55 Q1a3a SNP discovery and data documenting the phylogenetic position were privately communicated to the ISOGG Y-DNA Working Group. rs35768544,; 17922729
L56 Q1a3 SNP discovery and data documenting the phylogenetic position were privately communicated to the ISOGG Y-DNA Working Group. rs34703625,; 8208869
L57 Q1a3 SNP discovery and data documenting the phylogenetic position were privately communicated to the ISOGG Y-DNA Working Group. rs34864948,; 14083496
L61 R (Private SNPs) SNP discovery and data documenting the phylogenetic position were privately communicated to the ISOGG Y-DNA Working Group. 13842441
L62 R1a aka M513, Hinds et al (2005); Underhill et al (2009) rs17222573; 16400635
L63 R1a aka M511, Hinds et al (2005); Underhill et al (2009) rs17307677; 16672228
L65.1 I2b2 aka S159.1, SNP discovery and data documenting the phylogenetic position were privately communicated to the ISOGG Y-DNA Working Group. rs7893015; 15136011
L65.2 J1c3d1a aka S159.2, SNP discovery and data documenting the phylogenetic position were privately communicated to the ISOGG Y-DNA Working Group. rs7893015; 15136011..15136011 (+ strand)
L66 E1b1b1a4 aka S159, SNP discovery and data documenting the phylogenetic position were privately communicated to the ISOGG Y-DNA Working Group. 8527002
L67 E1b1b1a4 aka S159, SNP discovery and data documenting the phylogenetic position were privately communicated to the ISOGG Y-DNA Working Group. 15348956
L68 I2 SNP discovery and data documenting the phylogenetic position were privately communicated to the ISOGG Y-DNA Working Group. rs35547782; 17209544
L69.1(=G) IJK aka S163.1, SNP discovery and data documenting the phylogenetic position were privately communicated to the ISOGG Y-DNA Working Group. rs9786274; 14320356
L69.2(=T) I2a2a aka S163.2, SNP discovery and data documenting the phylogenetic position were privately communicated to the ISOGG Y-DNA Working Group. rs9786274; 14320356
L70 J2a4h1a1 SNP discovery and data documenting the phylogenetic position were privately communicated to the ISOGG Y-DNA Working Group. 16586410
L78 G2a3b1a1a SNP discovery and data documenting the phylogenetic position were privately communicated to the ISOGG Y-DNA Working Group. rs35285796; 13381370
L88.2 J5a4i SNP discovery and data documenting the phylogenetic position were privately communicated to the ISOGG Y-DNA Working Group. 16105236
L90 G2a3a1 aka S133; SNP discovery and data documenting the phylogenetic position were privately communicated to the ISOGG Y-DNA Working Group. rs35169834; 20087688
L91 G2a4 SNP discovery and data documenting the phylogenetic position were privately communicated to the ISOGG Y-DNA Working Group. 20104943 G>C
L92 J1c3c SNP discovery and data documenting the phylogenetic position were privately communicated to the ISOGG Y-DNA Working Group. 2948657
L93 J1c3c SNP discovery and data documenting the phylogenetic position were privately communicated to the ISOGG Y-DNA Working Group. 2948661
L94 E1a4 SNP discovery and data documenting the phylogenetic position were privately communicated to the ISOGG Y-DNA Working Group. 13935113
L120 R1a1 aka M516, Hinds et al (2005); Underhill et al (2009) rs17307105; 14388411
L121 I1 aka S62, SNP discovery and data documenting the phylogenetic position were privately communicated to the ISOGG Y-DNA Working Group; rs17222167
L122 R1a1 aka M448, Hinds et al (2005); Underhill et al (2009) rs17222202; 15029838
L124 I1 aka S64, SNP discovery and data documenting the phylogenetic position were privately communicated to the ISOGG Y-DNA Working Group; rs17307586
L125 I1 aka S65, SNP discovery and data documenting the phylogenetic position were privately communicated to the ISOGG Y-DNA Working Group; rs17249791
L126 I2b1a1 aka S165, SNP discovery and data documenting the phylogenetic position were privately communicated to the ISOGG Y-DNA Working Group. rs34790845; 13411027
L131 T3 SNP discovery and data documenting the phylogenetic position were privately communicated to the ISOGG Y-DNA Working Group. rs2215828; 17882202
L133 E1a3 SNP discovery and data documenting the phylogenetic position were privately communicated to the ISOGG Y-DNA Working Group. rs35573420; 6992199
L136 J1c SNP discovery and data10 documenting the phylogenetic position were privately communicated to the ISOGG Y-DNA Working Group. 7630823
L137 I2b1a1 aka S166; SNP discovery and data documenting the phylogenetic position were privately communicated to the ISOGG Y-DNA Working Group. rs34441307; 10401250
L139 G2a3b1a3 SNP discovery and data documenting the phylogenetic position were privately communicated to the ISOGG Y-DNA Working Group. 139981304 G>A
L144 R1b1b2a1a2f6 aka S175; SNP discovery and data documenting the phylogenetic position were privately communicated to the ISOGG Y-DNA Working Group. rs906842; 21120848
L140 G2a3b1a SNP discovery and data documenting the phylogenetic position were privately communicated to the ISOGG Y-DNA Working Group. 7630859 del T
L141 G2a3b SNP discovery and data documenting the phylogenetic position were privately communicated to the ISOGG Y-DNA Working Group. 2948607 ins A
L145 R1a aka M449. Hinds et al (2005); Underhill et al (2009) rs17306692; 12648745
L146 R1a aka M420, Hinds et al (2005); Underhill et al (2009) rs17250535; 21882589
L147 J1c3d SNP discovery and data documenting the phylogenetic position were privately communicated to the ISOGG Y-DNA Working Group. 6813258
L148 R1b1b2a1a1d2 SNP discovery and data documenting the phylogenetic position were privately communicated to the ISOGG Y-DNA Working Group. 15951058
L150 R1b1b2a SNP discovery and data documenting the phylogenetic position were privately communicated to the ISOGG Y-DNA Working Group. rs9785831; 10618791
L151 R1b1b2a1a SNP discovery and data documenting the phylogenetic position were privately communicated to the ISOGG Y-DNA Working Group. rs2082033; 15001941
L152 J2 SNP discovery and data documenting the phylogenetic position were privately communicated to the ISOGG Y-DNA Working Group. 20702954
L158 I2a1 SNP discovery and data documenting the phylogenetic position were privately communicated to the ISOGG Y-DNA Working Group. 21905948
L159 I2a1 SNP discovery and data documenting the phylogenetic position were privately communicated to the ISOGG Y-DNA Working Group. 14320358
L160 I2a1a SNP discovery and data documenting the phylogenetic position were privately communicated to the ISOGG Y-DNA Working Group. 14711938
L161 I2a1a1 SNP discovery and data documenting the phylogenetic position were privately communicated to the ISOGG Y-DNA Working Group. 20923106
L162 T2 aka Page 21; Repping et al (2006). rs34179999; 14528466
L164 R1b1b2a1a1d1a1 SNP discovery and data documenting the phylogenetic position were privately communicated to the ISOGG Y-DNA Working Group. 14211253
L165 R1b1b2a1a2e aka S68; SNP discovery and data documenting the phylogenetic position were privately communicated to the ISOGG Y-DNA Working Group. 20389703
L177 G2a3b2 SNP discovery and data documenting the phylogenetic position were privately communicated to the ISOGG Y-DNA Working Group. 23397163-23397164; 25030911-25030912; 25750263-25750264 ins AT
L178 I2a2 SNP discovery and data documenting the phylogenetic position were privately communicated to the ISOGG Y-DNA Working Group. 14083446
L184 G2a3a2 private; SNP discovery and data documenting the phylogenetic position were privately communicated to the ISOGG Y-DNA Working Group. 17586994
L185 G2a3a2 private; SNP discovery and data documenting the phylogenetic position were privately communicated to the ISOGG Y-DNA Working Group. 2092998
L191 Q (Private SNPs) Private; SNP discovery and data documenting the phylogenetic position were privately communicated to the ISOGG Y-DNA Working Group. 2947379 del A
L192.2 J2a4h1b SNP discovery and data documenting the phylogenetic position were privately communicated to the ISOGG Y-DNA Working Group. 6813342
L193 R1b1b2a1a2f5 aka S176; SNP discovery and data documenting the phylogenetic position were privately communicated to the ISOGG Y-DNA Working Group. 6813344
L196 R (Private SNPs) private; SNP discovery and data documenting the phylogenetic position were privately communicated to the ISOGG Y-DNA Working Group. 2947744
L198 J2a4i SNP discovery and data documenting the phylogenetic position were privately communicated to the ISOGG Y-DNA Working Group. 16105255
L201 G1a1 SNP discovery and data documenting the phylogenetic position were privately communicated to the ISOGG Y-DNA Working Group; discovered in Walk Through the Y. 2718285
L202 G1a1 SNP discovery and data documenting the phylogenetic position were privately communicated to the ISOGG Y-DNA Working Group; discovered in Walk Through the Y. 13001714
L203 G1a1 SNP discovery and data documenting the phylogenetic position were privately communicated to the ISOGG Y-DNA Working Group; discovered in Walk Through the Y. 13001715
L206 T SNP discovery and data documenting the phylogenetic position were privately communicated to the ISOGG Y-DNA Working Group. 16671880-16671881
L207.1 J2a4h SNP discovery and data documenting the phylogenetic position were privately communicated to the ISOGG Y-DNA Working Group. 6813448
L208 T2a aka Page 08; Repping et al (2006). rs35815655; 6796443
L210 J2a4b3 SNP discovery and data documenting the phylogenetic position were privately communicated to the ISOGG Y-DNA Working Group. 15001591
L212 J2a SNP discovery and data documenting the phylogenetic position were privately communicated to the ISOGG Y-DNA Working Group. 21120853
L213 Q1a3a SNP discovery and data documenting the phylogenetic position were privately communicated to the ISOGG Y-DNA Working Group. rs34549365; 8295033
L214 Q1b SNP discovery and data documenting the phylogenetic position were privately communicated to the ISOGG Y-DNA Working Group. rs34694026; 20365995
L215 Q1b SNP discovery and data documenting the phylogenetic position were privately communicated to the ISOGG Y-DNA Working Group. rs34601266; 13399368
L218 J2a4b3 SNP discovery and data documenting the phylogenetic position were privately communicated to the ISOGG Y-DNA Working Group. 20199331
L222 J1c3d1 SNP discovery and data documenting the phylogenetic position were privately communicated to the ISOGG Y-DNA Working Group. 15318872
L226 R1b1b2a1a2f4 aka S168; SNP discovery and data documenting the phylogenetic position were privately communicated to the ISOGG Y-DNA Working Group. 17558118
L227 J2a4b3 SNP discovery and data documenting the phylogenetic position were privately communicated to the ISOGG Y-DNA Working Group. 6919963
L228 J2 SNP discovery and data documenting the phylogenetic position were privately communicated to the ISOGG Y-DNA Working Group. 7831358
L232 Q1 SNP discovery and data documenting the phylogenetic position were privately communicated to the ISOGG Y-DNA Working Group. 16025489
L233 I2a3 SNP discovery and data documenting the phylogenetic position were privately communicated to the ISOGG Y-DNA Working Group. 12997370
L243 J2a4h1c SNP discovery and data documenting the phylogenetic position were privately communicated to the ISOGG Y-DNA Working Group. 16586405
L245 Q1b1 SNP discovery and data documenting the phylogenetic position were privately communicated to the ISOGG Y-DNA Working Group. 5735090
L254 J2a4h1d SNP discovery and data documenting the phylogenetic position were privately communicated to the ISOGG Y-DNA Working Group. 15002046
L257 R1b1b2a1a1e aka S186; SNP discovery and data documenting the phylogenetic position were privately communicated to the ISOGG Y-DNA Working Group. 14177422
L260 R1a1a1g2 SNP discovery and data documenting the phylogenetic position were privately communicated to the ISOGG Y-DNA Working Group. 16758224
L265 R1b1b2 SNP discovery and data documenting the phylogenetic position were privately communicated to the ISOGG Y-DNA Working Group. rs9786882; 8149348
L266 R2a SNP discovery and data documenting the phylogenetic position were privately communicated to the ISOGG Y-DNA Working Group. 8486362
L271 J2a4h1b1 SNP discovery and data documenting the phylogenetic position were privately communicated to the ISOGG Y-DNA Working Group. 17586712
L272 Q1b1a SNP discovery and data documenting the phylogenetic position were privately communicated to the ISOGG Y-DNA Working Group. 3496239
L273 Q1 SNP discovery and data documenting the phylogenetic position were privately communicated to the ISOGG Y-DNA Working Group. 16105268
L274 Q1 SNP discovery and data documenting the phylogenetic position were privately communicated to the ISOGG Y-DNA Working Group. 16105269
L275 Q1b SNP discovery and data documenting the phylogenetic position were privately communicated to the ISOGG Y-DNA Working Group. 17646282
L277 R (Private SNPs) SNP discovery and data documenting the phylogenetic position were privately communicated to the ISOGG Y-DNA Working Group. rs2538852; 10336023
L278 R1b1 SNP discovery and data documenting the phylogenetic position were privately communicated to the ISOGG Y-DNA Working Group. rs17249854; 17423835
LINE1 O+ + = See Note on Haplogroup Page; Santos et al (2000); YCC (2002); Butler (2003); Jobling et al (2003); Hammer et al (2005); Hammer et al (2006)    
LLY22g N1 YCC (2002); Jobling et al (2003); Behar et al (2004); Hammer et al (2005); Hammer et al (2006); Karafet et al (2008) 22124037; 22432174
M1 DE aka YAP; Underhill et al (2000); Nasidze et al (2004); King et al (2008) 20070279-20071402
M2 E1b1a aka SY81, aka DYS271; Seielstad et al (1994); Underhill et al (2000); Underhill et al (2001); Semino et al (2002); YCC (2002); Bortolini et al (2003); Butler (2003); Jobling et al (2003); Cinnioglu et al (2004); Cruciani et al (2004); Flores et al (2004); Semino et al (2004); Vallone et al (2004); Alonso et al (2005); Sengupta et al (2006); Karafet et al (2008) rs9785941; 12606577
M3 Q1a3a1 Underhill et al (1996); Su et al (1999); Underhill et al (2000); Hammer et al (2001); Underhill et al (2001); YCC (2002); Bortolini et al (2003); Butler (2003); Jobling et al (2003); Hammer et al (2005); Karafet et al (2008) rs3894; 17605757
M4 M1 Underhill et al (1997); Underhill et al (2000); Hammer et al (2001); Kayser et al (2001); Underhill et al (2001); YCC (2002); Butler (2003); Jobling et al (2003); Kayser et al (2003); Kayser et al (2006); Scheinfeldt et al (2006); Karafet et al (2008) rs3895; 2804628
M5 M1 aka P73, Underhill et al (1997); Underhill et al (2000); Hammer et al (2001);Kayser et al (2001); Underhill et al (2001); YCC (2002); Butler (2003); Jobling et al (2003); Hammer et al (2006); Karafet et al (2008) rs3896; 20069334
M6 A2 Underhill et al (1997); Underhill et al (2000); Hammer et al (2001); Underhill et al (2001); Semino et al (2002); YCC (2002); Butler (2003); Jobling et al (2003); Tan et al (2007); Karafet et al (2008) rs3897; 17080420
M7 O3a3b Underhill et al (1997); Su et al (1999); Underhill et al (2000); Underhill et al (2001); YCC (2002); Butler (2003); Jobling et al (2003); Shi et al (2005); Karafet et al (2008) rs3898; 4138217
M8 C1 Underhill et al (1997); Underhill et al (2000); Hammer et al (2001); Underhill et al (2001); YCC (2002); Butler (2003); Jobling et al (2003); Kivisild et al (2003); Hammer et al (2006); Sengupta et al (2006); Karafet et al (2008) rs3899; 7351534
M9 K Underhill et al (1997); Su et al (1999); Underhill et al (2000); Hammer et al (2001); Kayser et al (2001); Underhill et al (2001); Cruciani et al (2002); Semino et al (2002); YCC (2002); Bortolini et al (2003); Butler (2003); Jobling et al (2003); Kayser et al (2003); Kivisild et al (2003); Thangaraj et al (2003); Behar et al (2004); Deng et al (2004); Flores et al (2004); Nasidze et al (2004); Shen et al (2004); Alonso et al (2005); Capelli et al (2005); Hammer et al (2005); Nasidze et al (2005); Hammer et al (2006); Karlsson et al (2006); Kayser et al (2006); Scheinfeldt et al (2006); Sengupta et al (2006); Mona et al (2007); Karafet et al (2008); King et al (2008) rs3900; 20189645
M10 E1b1a6 Underhill et al (1997); Underhill et al (2000); Underhill et al (2001); Cruciani et al (2002); Semino et al (2002); YCC (2002); Butler (2003); Jobling et al (2003); Karafet et al (2008) rs3901; 20182386
M11 L Underhill et al (1997); Underhill et al (2000); Underhill et al (2001); Cruciani et al (2002); Semino et al (2002); YCC (2002); Butler (2003); Jobling et al (2003); Kivisild et al (2003); Thangaraj et al (2003); Cinnioglu et al (2004); Karafet et al (2008) rs3902; 20190035
M12 J2b Underhill et al (1997); Underhill et al (2000); Hammer et al (2001); Underhill et al (2001); Cruciani et al (2002); Semino et al (2002); YCC (2002); Butler (2003); Jobling et al (2003); Kivisild et al (2003); Cinnioglu et al (2004); Di Giacomo et al (2004); Semino et al (2004); Alonso et al (2005); Hammer et al (2005); Regueiro et al (2006); Sengupta et al (2006); Karafet et al (2008); King et al (2008) rs3903; 7643480
M13 A3b2 Underhill et al (1997); Underhill et al (2000); Hammer et al (2001); Underhill et al (2001); Cruciani et al (2002); Semino et al (2002); YCC (2002); Butler (2003); Jobling et al (2003); Cinnioglu et al (2004);Hammer et al (2005); Karafet et al (2008) rs3904; 20181486
M14 A2 Underhill et al (1997); Underhill et al (2000); Hammer et al (2001); Underhill et al (2001); Cruciani et al (2002); Semino et al (2002); YCC (2002); Butler (2003); Jobling et al (2003); Karafet et al (2008) rs3905; 20181656
M15 D1 Underhill et al (1997); Su et al (1999); Underhill et al (2000); Hammer et al (2001); Underhill et al (2001); YCC (2002); Butler (2003); Jobling et al (2003); Hammer et al (2006); Sengupta et al (2006); Karafet et al (2008) rs3906; 20184087-20184090
M16 M1b1a Underhill et al (1997); Underhill et al (2000); Hammer et al (2001); Kayser et al (2001); Underhill et al (2001); YCC (2002); Butler (2003); Jobling et al (2003); Scheinfeldt et al (2006); Karafet et al (2008) rs3907; 20069689
M17 R1a1a Underhill et al (1997); Su et al (1999); Underhill et al (2000); Underhill et al (2001); Cruciani et al (2002); YCC (2002); Butler (2003); Jobling et al (2003); Kivisild et al (2003); Behar et al (2004); Cinnioglu et al (2004); Deng et al (2004); Nasidze et al (2004); Capelli et al (2005); Hammer et al (2005); Nasidze et al (2005); Karlsson et al (2006); Sengupta et al (2006); Karafet et al (2008) rs3908; 20192556
M18 R1b1a Underhill et al (1997); Underhill et al (2000); Underhill et al (2001); Cruciani et al (2002); YCC (2002); Butler (2003); Jobling et al (2003); Karafet et al (2008); Zalloua et al (2008) rs3909; 20192550
M19 Q1a3a1a Underhill et al (1997); Underhill et al (2000); Underhill et al (2001); YCC (2002); Bortolini et al (2003); Butler (2003); Jobling et al (2003); Karafet et al (2008) rs3910; 20192619
M20 L Underhill et al (1997); Underhill et al (2000); Karafet et al (2001); Underhill et al (2001); YCC (2002); Butler (2003); Jobling et al (2003); Kivisild et al (2003); Behar et al (2004); Hammer et al (2005); Hammer et al (2006); Karafet et al (2008); King et al (2008) rs3911; 20192842
M21 I1a private=single individual; Underhill et al (1997); Underhill et al (2000); Kayser et al (2001); Underhill et al (2001); YCC (2002); Butler (2003); Jobling et al (2003); Rootsi et al (2004); Karafet et al (2008) rs3912; 20191727
M22 L Underhill et al (1997); Underhill et al (2000); Underhill et al (2001); YCC (2002); Butler (2003); Jobling et al (2003); Karafet et al (2008) rs3913; 13299557
M23 A2 Underhill et al (2000); Underhill et al (2001); Semino et al (2002); YCC (2002); Butler (2003); Jobling et al (2003); Karafet et al (2008) 20195627
M25 Q1a2 Underhill et al (2000); Underhill et al (2001); YCC (2002); Butler (2003); Jobling et al (2003); Cinnioglu et al (2004); Karafet et al (2008) 20326052
M26 I2a1 Underhill et al (2000); Underhill et al (2001); YCC (2002); Butler (2003); Jobling et al (2003); Flores et al (2004); Rootsi et al (2004); Alonso et al (2005); Capelli et al (2005); Karlsson et al (2006); Karafet et al (2008) rs2032629; 20325209
M27 L1 Underhill et al (2000); Underhill et al (2001); YCC (2002); Butler (2003); Jobling et al (2003); Kivisild et al (2003); Karafet et al (2008) 20199034
M28 A3a private=single individual in Ethopia: Underhill et al (2000); Underhill et al (2001); Cruciani et al (2002); Semino et al (2002); YCC (2002); Butler (2003); Jobling et al (2003); Karafet et al (2008) 20189227
M29 A2 aka P3 or PN3; Underhill et al (2000) 20069975
M30 B2b3 Underhill et al (2000); Underhill et al (2001); Cruciani et al (2002); YCC (2002); Butler (2003); Jobling et al (2003); Karafet et al (2008) 20199203
M31 A1a Underhill et al (2001); Cruciani et al (2002); YCC (2002); Butler (2003); Jobling et al (2003); Vallone et al (2004); Hammer et al (2005); Karafet et al (2008) 20199142
M32 A3 Underhill et al (2000); Underhill et al (2001); Cruciani et al (2002); Semino et al (2002); YCC (2002); Butler (2003); Jobling et al (2003); Hammer et al (2005); Karafet et al (2008) 20199824
M33 E1a Underhill et al (2001); Cruciani et al (2002); Semino et al (2002); YCC (2002); Butler (2003); Jobling et al (2003); Cruciani et al (2004); Semino et al (2004); Vallone et al (2004); Karafet et al (2008) 20199838
M34 E1b1b1c1 Underhill et al (2000); Underhill et al (2001); Cruciani et al (2002); YCC (2002); Butler (2003); Jobling et al (2003); Cruciani et al (2004); Flores et al (2004); Shen et al (2004); Karafet et al (2008); King et al (2008) 20200104
M35 E1b1b1 Underhill et al (2000); Underhill et al (2001); Cruciani et al (2002); Semino et al (2002); YCC (2002); Butler (2003); Jobling et al (2003); Behar et al (2004); Flores et al (2004); Cruciani et al (2004); Semino et al (2004); Vallone et al (2004); Alonso et al (2005); Capelli et al (2005); Hammer et al (2005); Karlsson et al (2006); Sengupta et al (2006); Karafet et al (2008); King et al (2008) 20201091
M36 H1a1 Underhill et al (2000); Underhill et al (2001); YCC (2002); Butler (2003); Jobling et al (2003); Karafet et al (2008) 20210397
M37 R1b1b2a1a2f1 private; Underhill et al (2000); Underhill et al (2001); YCC (2002); Butler (2003); Jobling et al (2003); Karafet et al (2008) 20210939
M38 C2 Underhill et al (2000); Underhill et al (2001); YCC (2002); Butler (2003); Jobling et al (2003); Kayser et al (2003); Kivisild et al (2003); Hammer et al (2006); Kayser et al (2006); Scheinfeldt et al (2006); Mona et al (2007); Karafet et al (2008) 20201546
M39 H1a3 Underhill et al (2000); Underhill et al (2001); YCC (2002); Butler (2003); Jobling et al (2003); Sengupta et al (2006); Karafet et al (2008) 20201636
M40 E aka SRY4064 or SRY8299; UWhitfield et al (1995); Hammer et al (1998); YCC (2002); Butler (2003); Jobling et al (2003); Behar et al (2004); Cruciani et al (2004); Semino et al (2004); Capelli et al (2005); Hammer et al (2005); Hammer et al (2006); Karafet et al (2008) rs9786608; 2723943
M41 E2a aka P210; Underhill et al (2000); Underhill et al (2001); Cruciani et al (2002); YCC (2002); Jobling et al (2003); Karafet et al (2008) 2723889
M42 BT Underhill et al (2000); Underhill et al (2001); Semino et al (2002); YCC (2002); Butler (2003); Jobling et al (2003); Deng et al (2004); Karafet et al (2008) rs2032630; 20326228
M43 B2a2a Underhill et al (2000); Underhill et al (2001); YCC (2002); Butler (2003); Jobling et al (2003); Karafet et al (2008) 7643271
M44 E1a1 Underhill et al (2001); Cruciani et al (2002); YCC (2002); Butler (2003); Jobling et al (2003); Karafet et al (2008) 20212032
M45 P Su et al (1999); Underhill et al (2000); Underhill et al (2001); Cruciani et al (2002); YCC (2002); Bortolini et al (2003); Butler (2003); Jobling et al (2003); Kivisild et al (2003); Thangaraj et al (2003); Deng et al (2004); Nasidze et al (2004); Shen et al (2004); Nasidze et al (2005); Karafet et al (2008) rs2032631; 20327175
M46 N1c aka Tat; Underhill et al (2000); Butler (2003); Repping et al (2006) rs34442126; 13431977
M47 J2a4a Underhill et al (2000); Underhill et al (2001); YCC (2002); Butler (2003); Jobling et al (2003) Cinnioglu et al (2004); Di Giacomo et al (2004); Semino et al (2004); Regueiro et al (2006); Sengupta et al (2006); Karafet et al (2008) 20210718
M48 C3c Underhill et al (2000); Underhill et al (2001); YCC (2002); Butler (2003); Jobling et al (2003); Karafet et al (2008) 20209269
M49 A2 Underhill et al (2000); Underhill et al (2001); Semino et al (2002); YCC (2002); Butler (2003); Jobling et al (2003); Karafet et al (2008) rs2032633; 20328114
M50 O1a2 Su et al (1999); Underhill et al (2000); Underhill et al (2001); YCC (2002); Butler (2003); Jobling et al (2003); Karafet et al (2008) rs2032632; 20328060
M51 A3b1 Underhill et al (2000); Underhill et al (2001); Cruciani et al (2002); Semino et al (2002); YCC (2002); Butler (2003); Jobling et al (2003); Repping et al (2006); Karafet et al (2008) rs34078768; 20328251
M52 H1 Underhill et al (2000); Underhill et al (2001); YCC (2002); Butler (2003); Jobling et al (2003); Behar et al (2004); Cinnioglu et al (2004); Sengupta et al (2006); Karafet et al (2008) 20212587
M54 E2b Underhill et al (2000); Underhill et al (2001); YCC (2002); Butler (2003); Jobling et al (2003); Karafet et al (2008) rs2032620; 20328652
M55 D2 Underhill et al (2000); Underhill et al (2001); YCC (2002); Butler (2003); Jobling et al (2003); Hammer et al (2006); Karafet et al (2008) rs2032621; 20332126
M56 R1a1a1a private; Underhill et al (2000); Underhill et al (2001); YCC (2002); Butler (2003); Jobling et al (2003); Karafet et al (2008) rs2032622; 20332274
M57 D2 Underhill et al (2000); Underhill et al (2001); YCC (2002); Butler (2003); Jobling et al (2003); Hammer et al (2006); Karafet et al (2008) 20211305
M58 E1b1a1 Underhill et al (2000); Underhill et al (2001); Cruciani et al (2002); Semino et al (2002); YCC (2002); Butler (2003); Jobling et al (2003); Semino et al (2004); Karafet et al (2008) 20195692
M59 A3a private=single individual in Ethopia: Underhill et al (2000); Underhill et al (2001); Semino et al (2002); YCC (2002); Butler (2003); Jobling et al (2003); Karafet et al (2008) 20328164
M60 B Underhill et al (2000); Underhill et al (2001); Cruciani et al (2002); Semino et al (2002); YCC (2002); Butler (2003); Jobling et al (2003); Deng et al (2004); Vallone et al (2004); Hammer et al (2005); Karafet et al (2008) rs2032623; 20337460-20337461
M61 L Underhill et al (2000); Underhill et al (2001); YCC (2002); Butler (2003); Jobling et al (2003); Kivisild et al (2003); Repping et al (2006); Karafet et al (2008) rs34289137; 20210837
M62 J1a Underhill et al (2000); Underhill et al (2001); YCC (2002); Butler (2003); Jobling et al (2003); Semino et al (2004); Karafet et al (2008) 7643254
M63 A (Notes) Underhill et al (2000); Underhill et al (2001); Semino et al (2002); YCC (2002); Butler (2003); Jobling et al (2003); Karafet et al (2008) rs2032625; 20330026
M64.1 (M64a) D2 Underhill et al (2000); Underhill et al (2001); YCC (2002); Butler (2003); Jobling et al (2003); Deng et al (2004); Hammer et al (2006); Karafet et al (2008) rs2032626; 20362771
M64.2 (M64b) R1a1a1c Underhill et al (2001); YCC (2002); Butler (2003); Jobling et al (2003); Karafet et al (2008) rs2032626; 20362771
M65 R1b1b2a1a2a private; private=Underhill et al (2000); Underhill et al (2001); YCC (2002); Butler (2003); Jobling et al (2003); Karafet et al (2008) 20365653
M66 E1b1a6 Underhill et al (2000), Underhill et al (2001); Cruciani et al (2002); YCC (2002); Butler (2003); Jobling et al (2003); Karafet et al (2008) rs2032627; 20340961
M67 J2a4b aka S51; Underhill et al (2000); Underhill et al (2001); Cruciani et al (2002); YCC (2002); Butler (2003); Jobling et al (2003); Kivisild et al (2003); Cinnioglu et al (2004); Di Giacomo et al (2004); Flores et al (2004); Semino et al (2004); Shen et al (2004); Alonso et al (2005); Regueiro et al (2006); Sengupta et al (2006); Karafet et al (2008); King et al (2008) rs2032628; 20338197
M68 J2a4c Underhill et al (2000); Underhill et al (2001); Cruciani et al (2002); YCC (2002); Butler (2003); Jobling et al (2003); Semino et al (2004); Sengupta et al (2006) 20338088
M69 H Underhill et al (2000); Underhill et al (2001); YCC (2002); Butler (2003); Jobling et al (2003); Hammer et al (2006); Scheinfeldt et al (2006); Sengupta et al (2006); Karafet et al (2008) rs2032673; 20353446
M70 T Underhill et al (2001); Cruciani et al (2002); Semino et al (2002); YCC (2002); Butler (2003); Jobling et al (2003); Kivisild et al (2003); Cinnioglu et al (2004); Flores et al (2004); Alonso et al (2005); Hammer et al (2005); Hammer et al (2006); Sengupta et al (2006); Karafet et al (2008); King et al (2008) rs2032672; 20353269
M71 A2 Underhill et al (2000); Underhill et al (2001); Cruciani et al (2002); Semino et al (2002); YCC (2002); Butler (2003); Jobling et al (2003); Karafet et al (2008) rs2032638; 20353835
M72 I1b1 Underhill et al (2000); Underhill et al (2001); YCC (2002); Butler (2003); Jobling et al (2003); Rootsi et al (2004); Karafet et al (2008) rs2032637; 20353795
M73 R1b1b1 Underhill et al (2000); Underhill et al (2001); Cruciani et al (2002); YCC (2002); Butler (2003); Jobling et al (2003); Cinnioglu et al (2004); Sengupta et al (2006); Karafet et al (2008) rs2032634; 20348262-20348263
M74 P aka N12; Underhill et al (2000); Underhill et al (2001); YCC (2002); Butler (2003); Jobling et al (2003); Kayser et al (2003); Scheinfeldt et al (2006); Karafet et al (2008); King et al (2008) rs2032635; 20349155
M75 E2 Underhill et al (2000); Underhill et al (2001); Cruciani et al (2002); Semino et al (2002); YCC (2002); Butler (2003); Jobling et al (2003); Cruciani et al (2004); Semino et al (2004); Vallone et al (2004); Karafet et al (2008) rs2032639; 20349565
M76 L1 Underhill et al (2000); Underhill et al (2001); YCC (2002); Butler (2003); Jobling et al (2003); Sengupta et al (2006); Karafet et al (2008) 20216704
M77 C3c Underhill et al (2000); Underhill et al (2001); YCC (2002); Butler (2003); Jobling et al (2003); Karafet et al (2008) 20218526
M78 E1b1b1a Underhill et al (2000); Underhill et al (2001); Cruciani et al (2002); Semino et al (2002); YCC (2002); Butler (2003); Jobling et al (2003); Behar et al (2004); Cinnioglu et al (2004); Cruciani et al (2004); Flores et al (2004); Semino et al (2004); Shen et al (2004); Alonso et al (2005); Hammer et al (2005); Karlsson et al (2006); Sengupta et al (2006); Karafet et al (2008); King et al (2008) 20352691
M81 E1b1b1b Underhill et al (2000); Underhill et al (2001); Cruciani et al (2002); Semino et al (2002); YCC (2002); Butler (2003); Jobling et al (2003); Behar et al (2004); Cinnioglu et al (2004); Cruciani et al (2004); Flores et al (2004); Semino et al (2004); Alonso et al (2005); Karafet et al (2008); King et al (2008) rs2032640; 20351960
M82 H1a Underhill et al (2000); Underhill et al (2001); YCC (2002); Butler (2003); Jobling et al (2003); Karafet et al (2008) rs2032675; 20353562
M83 M1b1b Underhill et al (2000); Underhill et al (2001); YCC (2002); Jobling et al (2003); Karafet et al (2008) rs2032641; 20332675
M84 E1b1b1c1a Shen et al (2000) Karafet et al (2008) rs2032642; 20357751
M85 E2b1 Underhill et al (2000); Underhill et al (2001); Cruciani et al (2002); YCC (2002); Butler (2003); Jobling et al (2003); Karafet et al (2008) rs2032616; 20355604
M86 C3c1 Underhill et al (2000); Underhill et al (2001); YCC (2002); Butler (2003); Jobling et al (2003); Deng et al (2004); Hammer et al (2006); Palanchy et al (2006); Karafet et al (2008) rs2032643; 20365305
M87 R1a1a1c Underhill et al (2000); Underhill et al (2001); YCC (2002); Butler (2003); Jobling et al (2003); Karafet et al (2008) rs2032644; 20365497
M88 O2a1 Su et al (1999); Underhill et al (2001); YCC (2002); Butler (2003); Jobling et al (2003); Deng et al (2004); Karafet et al (2008) rs2032645; 20360237
M89 F Su et al (1999); Underhill et al (2000); Underhill et al (2001); Cruciani et al (2002); Semino et al (2002); Butler (2003); Jobling et al (2003); Kayser et al (2003); Kivisild et al (2003); Deng et al (2004); Flores et al (2004); Nasidze et al (2004); Alonso et al (2005); Capelli et al (2005); Nasidze et al (2005); Karlsson et al (2006); Scheinfeldt et al (2006); Sengupta et al (2006); Karafet et al (2008) rs2032652; 20376701
M90 E2b Underhill et al (2000); Underhill et al (2001); YCC (2002); Butler (2003); Jobling et al (2003); Karafet et al (2008) rs2032646; 20383717
M91 A Underhill et al (2000); Underhill et al (2001); Cruciani et al (2002); Semino et al (2002); YCC (2002); Butler (2003); Jobling et al (2003); Deng et al (2004); Hammer et al (2005); Karafet et al (2008) rs2032651; 20366926
M92 J2a4b1 Underhill et al (2000); Underhill et al (2001); YCC (2002); Butler (2003); Jobling et al (2003); Cinnioglu et al (2004); Di Giacomo et al (2004); Semino et al (2004); Alonso et al (2005); Regueiro et al (2006); Sengupta et al (2006); Karafet et al (2008); King et al (2008) rs2032648; 20363411
M93 C3a Underhill et al (2000); Underhill et al (2001); YCC (2002); Butler (2003); Jobling et al (2003); Sengupta et al (2005); Sengupta et al (2006); Karafet et al (2008) 20361893
M94 BT Underhill et al (2000); Underhill et al (2001); Semino et al (2002); YCC (2002); Butler (2003); Jobling et al (2003); Deng et al (2004); Karafet et al (2008); King et al (2008) rs2032647; 20397546
M95 O2a Su et al (1999); Underhill et al (2000); Hammer et al (2001); Underhill et al (2001); YCC (2002); Butler (2003); Jobling et al (2003); Kayser et al (2003); Thangaraj et al (2003); Deng et al (2004); Shi et al (2005); Hammer et al (2005); Hammer et al (2006); Kayser et al (2006); Sengupta et al (2006); Tan et al (2007); Karafet et al (2008) rs2032650; 20397832
M96 E Underhill et al (2000); Underhill et al (2001); Semino et al (2002); YCC (2002); Butler (2003); Jobling et al (2003); Cruciani et al (2004); Karafet et al (2008) rs9306841; 20238386
M97 H1a2 Underhill et al (2000); Underhill et al (2001); YCC (2002); Butler (2003); Jobling et al (2003); Karafet et al (2008) 20238101
M98 E2b Underhill et al (2000); Underhill et al (2001); Cruciani et al (2002); YCC (2002); Butler (2003); Jobling et al (2003); Karafet et al (2008) 20238622
M99 J2b2a Underhill et al (2000); Underhill et al (2001); Cruciani et al (2002); YCC (2002); Butler (2003); Jobling et al (2003); Sengupta et al (2006); Karafet et al (2008) 20238683
M101 O1a1a Underhill et al (2001); YCC (2002); Butler (2003); Jobling et al (2003); Karafet et al (2008) 20176860
M102 J2b Underhill et al (2000); Underhill et al (2001); Cruciani et al (2002); YCC (2002); Butler (2003); Jobling et al (2003); Kivisild et al (2003); Semino et al (2004); Regueiro et al (2006); Sengupta et al (2006); Karafet et al (2008) rs2032608; 20385500
M103 O1a2 Su et al (1999); Underhill et al (2000); Underhill et al (2001); YCC (2002); Butler (2003); Jobling et al (2003); Karafet et al (2008) rs2032609; 20395526
M104 M1b1 aka P22; Underhill et al (2000); Underhill et al (2001); Hammer et al (2001); YCC (2002); Butler (2003); Jobling et al (2003); Kayser et al (2003); Kayser et al (2006); Karafet et al (2008) 8679592; 8680324
M105 C1 Underhill et al (2000); Underhill et al (2001); YCC (2002); Butler (2003); Jobling et al (2003); Karafet et al (2008) rs2032612; 20325879
M106 M1 Underhill et al (2000); Underhill et al (2001); YCC (2002); Butler (2003); Jobling et al (2003); Karafet et al (2008) rs2032611; 20325812
M107 E1b1b1b1 private=single individual in Mali: Underhill et al (2000); Underhill et al (2001); Cruciani et al (2002); YCC (2002); Butler (2003); Jobling et al (2003); Karafet et al (2008) rs2032613; 20391026
M108.1 (M108a) B2a2 Underhill et al (2000); Underhill et al (2001); Cruciani et al (2002); YCC (2002); Butler (2003); Jobling et al (2003); Karafet et al (2008) rs2032679; 20392323
M108.2 (M108b) B2b3a Underhill et al (2000); Underhill et al (2001); Cruciani et al (2002); YCC (2002); Butler (2003); Jobling et al (2003); Karafet et al (2008) rs2032679; 20392323
M109 B2a1a Underhill et al (2000); Underhill et al (2001); Cruciani et al (2002); YCC (2002); Butler (2003); Jobling et al (2003); Karafet et al (2008) 20233568
M110 O1a2 Su et al (1999); Underhill et al (2000); Underhill et al (2001); YCC (2002); Butler (2003); Jobling et al (2003); Hammer et al (2006); Karafet et al (2008) 20366485
M111 O2a1 Su et al (1999); Underhill et al (2000); Underhill et al (2001); YCC (2002); Butler (2003); Jobling et al (2003); Hammer et al (2006); Karafet et al (2008) 20226693-20226694
M112 B2b Underhill et al (2000); Underhill et al (2001); Cruciani et al (2002); Semino et al (2002); YCC (2002); Butler (2003); Jobling et al (2003); Karafet et al (2008) 20227347
M113 O3a3b1 Underhill et al (2000); Underhill et al (2001); YCC (2002); Butler (2003); Jobling et al (2003); Shi et al (2005); Karafet et al (2008) 20227521
M114 A2a Underhill et al (2000); Underhill et al (2001); Cruciani et al (2002); Semino et al (2002); YCC (2002); Butler (2003); Jobling et al (2003); Karafet et al (2008) 20225151
M115 B2b2 Underhill et al (2000); Underhill et al (2001); Cruciani et al (2002); YCC (2002); Butler (2003); Jobling et al (2003); Karafet et al (2008) 20225698
M116.1 (M116a) D2a Underhill et al (2000); Underhill et al (2001); Cruciani et al (2002); YCC (2002); Jobling et al (2003); Hammer et al (2005); Hammer et al (2006); Karafet et al (2008) 20224669
M116.2 (M116b) E1b1a2 private=single individual in Mali: Underhill et al (2000); Underhill et al (2001); YCC (2002); Butler (2003); Jobling et al (2003); Karafet et al (2008) 20224669
M117 O3a3c1 Underhill et al (2000); Underhill et al (2001); YCC (2002); Butler (2003); Jobling et al (2003); Shi et al (2005); Karafet et al (2008) 20224700-20224703
M118 A3b2b Underhill et al (2000); Underhill et al (2001); Cruciani et al (2002); Semino et al (2002); YCC (2002); Butler (2003); Jobling et al (2003); Karafet et al (2008) 20223353
M119 O1a Su et al (1999); Underhill et al (2000); Karafet et al (2001); Kayser et al (2001); Underhill et al (2001); YCC (2002); Butler (2003); Jobling et al (2003); Kayser et al (2003); Shi et al (2005); Hammer et al (2005); Hammer et al (2006); Kayser et al (2006); Scheinfeldt et al (2006); Sengupta et al (2006); Mona et al (2007); Karafet et al (2008) 20222073
M120 Q1a1 Su et al (1999); Underhill et al (2000); Underhill et al (2001); YCC (2002); Butler (2003); Jobling et al (2003); Deng et al (2004); Sengupta et al (2006); Karafet et al (2008) 20366782
M121 O3a1 Underhill et al (2000); Kayser et al (2001); Underhill et al (2001); YCC (2002); Butler (2003); Jobling et al (2003); Shi et al (2005); Karafet et al (2008) 20366558
M122 O3 Su et al (1999); Underhill et al (2000); Hammer et al (2001); Underhill et al (2001); YCC (2002); Butler (2003); Jobling et al (2003); Kayser et al (2003); Thangaraj et al (2003); Cinnioglu et al (2004); Shi et al (2005); Hammer et al (2005); Hammer et al (2006); Kayser et al (2006); Scheinfeldt et al (2006); Sengupta et al (2006); Mona et al (2007); Karafet et al (2008) 20224062
M123 E1b1b1c Underhill et al (2000); Underhill et al (2001); Cruciani et al (2002); Semino et al (2002); YCC (2002); Butler (2003); Jobling et al (2003); Cinnioglu et al (2004); Cruciani et al (2004); Flores et al (2004); Semino et al (2004); Shen et al (2004); Karafet et al (2008); King et al (2008) 20223974
M124 R2a Underhill et al (2000); Underhill et al (2001); Butler (2003); Jobling et al (2003); Kivisild et al (2003); Cinnioglu et al (2004); Nasidze et al (2004); Nasidze et al (2005); Sengupta et al (2006); Karafet et al (2008) 20223889
M125 D2a1 Underhill et al (2000); Underhill et al (2001); YCC (2002); Butler (2003); Jobling et al (2003); Hammer et al (2005); Hammer et al (2006); Karafet et al (2008) rs2032614; 20389675
M126 R1b1b2a1a2d1 private=Underhill et al (2000); Underhill et al (2001); YCC (2002); Butler (2003); Jobling et al (2003); Karafet et al (2008) rs2032615; 20389651-20389654
M127 A3b2 Underhill et al (2000); Underhill et al (2001); Semino et al (2002); YCC (2002); Butler (2003); Jobling et al (2003); Karafet et al (2008) 20222661
M128 N1a Underhill et al (2000); Underhill et al (2001); YCC (2002); Butler (2003); Hammer et al (2006); Karafet et al (2008) 20227318-20227319
M129 B2b3 Underhill et al (2000); Underhill et al (2001); YCC (2002); Butler (2003); Jobling et al (2003); Karafet et al (2008) 20177105
M130 C aka RPS4Y711; Repping et al (2006); Karafet et al (2008) rs35284970; 2794854
M131 C1 Underhill et al (2000); Underhill et al (2001); YCC (2002); Butler (2003); Jobling et al (2003); Karafet et al (2008) 20173766-20173774
M132 E1a Underhill et al (2001); Cruciani et al (2002); YCC (2002); Butler (2003); Jobling et al (2003); Cruciani et al (2004); Karafet et al (2008) rs2032617; 20355649
M133 O3a3c1 Underhill et al (2000); Underhill et al (2001); YCC (2002); Butler (2003); Jobling et al (2003); Shi et al (2005); Karafet et al (2008) 20175715
M134 O3a3c Su et al (1999); Underhill et al (2000); Karafet et al (2001); Underhill et al (2001); YCC (2002); Butler (2003); Jobling et al (2003); Shi et al (2005); Hammer et al (2005); Hammer et al (2006); Kayser et al (2006); Sengupta et al (2006); Tan et al (2007); Karafet et al (2008) 20175606
M135 A2 Underhill et al (2000); Underhill et al (2001); Semino et al (2002); YCC (2002); Butler (2003); Jobling et al (2003); Karafet et al (2008) 20175681
M136 E1b1b1c1a1 Underhill et al (2000); Underhill et al (2001); Cruciani et al (2002); YCC (2002); Butler (2003); Jobling et al (2003); Karafet et al (2008) rs2032618; 20353141
M137 J2a4h1a1a Underhill et al (2000); Underhill et al (2001); YCC (2002); Butler (2003); Jobling et al (2003); Semino et al (2004); Sengupta et al (2006); Karafet et al (2008) 20223846
M138 H1a3 Underhill et al (2000); Underhill et al (2001); YCC (2002); Butler (2003); Jobling et al (2003); Karafet et al (2008) 20172243
M139 BT Underhill et al (2000); Underhill et al (2001); Semino et al (2002); YCC (2002); Butler (2003); Jobling et al (2003); Karafet et al (2008) 20165775-20165778
M141 A2 Underhill et al (2000); Underhill et al (2001); Semino et al (2002); YCC (2002); Butler (2003); Jobling et al (2003); Karafet et al (2008) 20165365
M143 Q1a2 Underhill et al (2000); Underhill et al (2001); YCC (2002); Butler (2003); Jobling et al (2003); Karafet et al (2008) 20349206
M144 A3b Underhill et al (2000); Underhill et al (2001); Semino et al (2002); YCC (2002); Butler (2003); Jobling et al (2003); Karafet et al (2008) rs2032619; 20384888
M145 DE aka P205; Underhill et al (2000); Underhill et al (2001); Semino et al (2002); YCC (2002); Butler (2003); Jobling et al (2003); Karafet et al (2008) rs3848982; 20176596
M146 B1a Underhill et al (2000); Underhill et al (2001); Cruciani et al (2002); YCC (2002); Butler (2003); Jobling et al (2003); Karafet et al (2008) 20238639
M147 K1 private=single individual: Underhill et al (2000); Underhill et al (2001); YCC (2002); Butler (2003); Jobling et al (2003); Karafet et al (2008) 20221469
M148 E1b1b1a3a private=single individual in Pakistan/India: Underhill et al (2000); Underhill et al (2001); Cruciani et al (2002); YCC (2002); Butler (2003); Jobling et al (2003); Karafet et al (2008) 20355481
M149 E1b1a3 private=single individual in South Africa: Underhill et al (2000); Underhill et al (2001); Cruciani et al (2002); YCC (2002); Butler (2003); Jobling et al (2003); Karafet et al (2008) 20355636
M150 B2a Underhill et al (2000); Underhill et al (2001); Cruciani et al (2002); Semino et al (2002); YCC (2002); Butler (2003); Jobling et al (2003); Vallone et al (2004); Hammer et al (2005); Karafet et al (2008) 20328907
M151 D2a2 Underhill et al (2000); Underhill et al (2001); YCC (2002); Butler (2003); Jobling et al (2003); Karafet et al (2008) 20352022
M152 B2a1a Underhill et al (2000); Underhill et al (2001); YCC (2002); Butler (2003); Jobling et al (2003); Hammer et al (2005); Karafet et al (2008) 20327456
M153 R1b1b2a1a2b Underhill et al (2000); Underhill et al (2001); YCC (2002); Butler (2003); Jobling et al (2003); Flores et al (2004); Alonso et al (2005); Karafet et al (2008) 20165748
M154 E1b1a4 Underhill et al (2000); Underhill et al (2001); Cruciani et al (2002); Semino et al (2002); YCC (2002); Butler (2003); Jobling et al (2003); Semino et al (2004); Karafet et al (2008) 20352065
M155 E1b1a5 private=single individual in Mali: Underhill et al (2000); Underhill et al (2001); Cruciani et al (2002); YCC (2002); Butler (2003); Jobling et al (2003); Karafet et al (2008) 20195719
M156 E1b1a6 Underhill et al (2000); Underhill et al (2001); Cruciani et al (2002); YCC (2002); Butler (2003); Jobling et al (2003); Karafet et al (2008) 20176615
M157 R1a1a1b private=Underhill et al (2000); Underhill et al (2001); YCC (2002); Butler (2003); Jobling et al (2003); Karafet et al (2008) 20327242
M158 J2a4h2 Underhill et al (2000); Underhill et al (2001); YCC (2002); Butler (2003); Jobling et al (2003); Cinnioglu et al (2004); Semino et al (2004); Sengupta et al (2006); Karafet et al (2008) 20175754
M159 O3a3a Underhill et al (2000); Underhill et al (2001); YCC (2002); Butler (2003); Jobling et al (2003); Shi et al (2005); Karafet et al (2008) 20210828
M160 R1b1b2a1a2d2 private; Underhill et al (2000); Underhill et al (2001); YCC (2002); Butler (2003); Jobling et al (2003); Karafet et al (2008) 20348253
M161 I2a1a Underhill et al (2000); Underhill et al (2001); YCC (2002); Butler (2003); Jobling et al (2003); Karafet et al (2008) 20176903
M162 O3a3c1a Underhill et al (2000); Underhill et al (2001); YCC (2002); Jobling et al (2003); Shi et al (2005); Karafet et al (2008) 8679632; 8680283
M163 J2a4b2 Underhill et al (2000); Underhill et al (2001); YCC (2002); Butler (2003); Jobling et al (2003); Sengupta et al (2006); Karafet et al (2008) 20189745
M164 O3a2 Underhill et al (2000); Underhill et al (2001); YCC (2002); Butler (2003); Jobling et al (2003); Shi et al (2005); Karafet et al (2008) 20216694
M165 E1b1b1b2a private=single individual in the Middle East: Underhill et al (2000); Underhill et al (2001); Cruciani et al (2002); YCC (2002); Butler (2003); Jobling et al (2003); Karafet et al (2008) 20326063
M166 J2a4b2 Underhill et al (2000); Underhill et al (2001); YCC (2002); Butler (2003); Jobling et al (2003); Semino et al (2004); Sengupta et al (2006); Karafet et al (2008) 20224082
M167 R1b1b2a1a2c aka SRY2627; Veitia et al (1997); Underhill et al (2000); Underhill et al (2001); Butler (2003); Jobling et al (2003); Flores et al (2004); Alonso et al (2005); Karafet et al (2008) rs1800865; 2718271
M168 CF Underhill et al (2000); Underhill et al (2001); Cruciani et al (2002); Semino et al (2002); YCC (2002); Butler (2003); Jobling et al (2003); Deng et al (2004); Karafet et al (2008); King et al (2008) rs2032595; 13323385
M169 B2b2 Underhill et al (2000); Underhill et al (2001); YCC (2002); Butler (2003); Jobling et al (2003); Karafet et al (2008) rs2032594; 13323111
M170 I Underhill et al (2000); Underhill et al (2001); Cruciani et al (2002); YCC (2002); Butler (2003); Jobling et al (2003); Kivisild et al (2003); Cinnioglu et al (2004); Flores et al (2004); Nasidze et al (2004); Rootsi et al (2004); Shen et al (2004); Vallone et al (2004); Alonso et al (2005); Athey et al (2005); Capelli et al (2005); Nasidze et al (2005); Karlsson et al (2006); Scheinfeldt et al (2006); Sengupta et al (2006); Karafet et al (2008) rs2032597; 13357186
M171 A3b2a private=single individual in Sudan: Underhill et al (2000); Underhill et al (2001); Cruciani et al (2002); Semino et al (2002); YCC (2002); Butler (2003); Jobling et al (2003); Karafet et al (2008) 13323454
M172 J2 Underhill et al (2000); Karafet et al (2001); Underhill et al (2001); Cruciani et al (2002); Semino et al (2002); YCC (2002); Butler (2003); Jobling et al (2003); Kivisild et al (2003); Behar et al (2004); Cinnioglu et al (2004); Di Giacomo et al (2004); Flores et al (2004); Nasidze et al (2004); Semino et al (2004); Shen et al (2004); Alonso et al (2005); Capelli et al (2005); Hammer et al (2005); Nasidze et al (2005); Regueiro et al (2006); Sengupta et al (2006); Karafet et al (2008); King et al (2008) rs2032604; 13479028
M173 R1 aka P241; Underhill et al (2000); Karafet et al (2001); Underhill et al (2001); Cruciani et al (2002); Semino et al (2002); YCC (2002); Butler (2003); Jobling et al (2003); Kayser et al (2003); Kivisild et al (2003); Behar et al (2004); Cinnioglu et al (2004); Flores et al (2004); Nasidze et al (2004) Alonso et al (2005); Capelli et al (2005); Hammer et al (2005); Nasidze et al (2005); Sengupta et al (2006); Karafet et al (2008) rs2032624; 13535818
M174 D Underhill et al (2000); Karafet et al (2001); Underhill et al (2001); Cruciani et al (2002); YCC (2002); Butler (2003); Jobling et al (2003); Thangaraj et al (2003); Cruciani et al (2004); Deng et al (2004); Hammer et al (2005); Hammer et al (2006); Sengupta et al (2006); Karafet et al (2008) rs2032602; 13463674
M175 O Underhill et al (2000); Karafet et al (2001); Underhill et al (2001); Cruciani et al (2002); YCC (2002); Butler (2003); Jobling et al (2003); Kayser et al (2003); Behar et al (2004); Deng et al (2004); Rootsi (Oct 2004); Shen et al (2004); Shi et al (2005); Hammer et al (2005); Hammer et al (2006); Kayser et al (2006); Scheinfeldt et al (2006); Sengupta et al (2006); Karafet et al (2008) rs2032678; 14018100-14018104
M176 O2b aka SRY465; Underhill et al (2001); Repping et al (2006); Sengupta et al (2006); Karafet et al (2008) rs11575897; 2715180
M177 M2a aka SRY9138; Underhill et al (2001); Kayser et al (2006); Karafet et al (2008) 2718869
M178 N1c1 Underhill et al (2001); Butler (2003); Jobling et al (2003); Cinnioglu et al (2004); Flores et al (2004); Hammer et al (2006); Karafet et al (2008) 20201143
M179 D2 Underhill et al (2001); Butler (2003); Karafet et al (2008) rs2032596; 13348094
M180 E1b1a aka P88; Underhill et al (2001); Semino et al (2002); Butler (2003); Jobling et al (2003); Karafet et al (2008) rs2032598; 13359735
M181 B Underhill et al (2001); YCC (2002); Butler (2003); Jobling et al (2003); Karafet et al (2008) rs2032599; 13360948
M182 B2 Underhill et al (2001); Cruciani et al (2002); Semino et al (2002); YCC (2002); Butler (2003); Jobling et al (2003); Vallone et al (2004); Karafet et al (2008) rs2032601; 13378470
M183 E1b1b1b2 Underhill et al (2001); Butler (2003); Karafet et al (2008) rs2032600; 13398177
M184 T aka USP9Y+3178; Sun et al (1999); Underhill et al (2001); Butler (2003); Repping et al (2003); Rozen et al (2003); Karafet et al (2008) rs20320; 13407557
M185 L L Underhill et al (2001); Butler (2003); Deng et al (2004); Karafet et al (2008) rs2032607; 13414253
M186 M1 Underhill et al (2001); YCC (2002); Butler (2003); Jobling et al (2003); Karafet et al (2008) rs2032681; 13432855
M188 O3a3b1 Underhill et al (2000); Underhill et al (2001); Butler (2003); Deng et al (2004); Shi et al (2005); Karafet et al (2008) rs2032605; 13434263
M189 M1 Underhill et al (2001); YCC (2002); Butler (2003); Jobling et al (2003); Karafet et al (2008) rs2032606; 13455099
M190 A3b Underhill et al (2001); YCC (2002); Butler (2003); Jobling et al (2003); Karafet et al (2008) rs2032603; 13477921
M191 E1b1a7 aka P86; Underhill et al (2001); Cruciani et al (2002); Semino et al (2002); Butler (2003); Jobling et al (2003); Semino et al (2004); Karafet et al (2008) rs2032590; 13529007
M192 B2b Underhill et al (2001); Butler (2003); Karafet et al (2008) rs2032662; 13523656
M193 T Underhill et al (2001); Butler (2003); Karafet et al (2008) rs2032676; 13523899
M194 Q1a3a1b Underhill et al (2001); YCC (2002); Butler (2003); Karafet et al (2008) rs2032677; 13523944
M195 E1b1a6 Underhill et al (2001); Butler (2003); Karafet et al (2008) rs2032680; 13525930
M196 A2 Underhill et al (2001)10; Semino et al (2002); YCC (2002); Butler (2003); Jobling et al (2003); Karafet et al (2008) rs2032591; 13540076
M197 H1a1 Underhill et al (2001); Butler (2003); Sengupta et al (2006); Karafet et al (2008) rs2032610; 13534992
M198 R1a1a Underhill et al (2001); Butler (2003); Shen et al (2004); Karafet et al (2008); King et al (2008) rs2020857; 13540146
M199 Q1a3a1c Underhill et al (2001); YCC (2002); Butler (2003); Jobling et al (2003); Karafet et al (2008) rs2032589; 13540504
M200 E2b1a Underhill et al (2001); Cruciani et al (2002); Butler (2003); Karafet et al (2008) rs2032593; 13540810
M201 G Underhill et al (2001); Cruciani et al (2002); Semino et al (2002); YCC (2002); Butler (2003); Jobling et al (2003); Kivisild et al (2003); Behar et al (2004); Cinnioglu et al (2004); Flores et al (2004); Nasidze et al (2004); Shen et al (2004); Vallone et al (2004); Hammer et al (2005); Nasidze et al (2005); Hammer et al (2006); Karlsson et al (2006); Scheinfeldt et al (2006); Karafet et al (2008); King et al (2008) rs2032636; 13536923
M202 A3b2 Underhill et al (2001); Semino et al (2002); Butler (2003); Jobling et al (2003); Karafet et al (2008) rs2032649; 13538886
M203 DE Underhill et al (2001); Semino et al (2002); YCC (2002); Butler (2003); Jobling et al (2003); Deng et al (2004); Shen et al (2004); Karafet et al (2008) rs2032653; 14100931
M204 R1a1a1c Underhill et al (2001); Butler (2003); Deng et al (2004); Karafet et al (2008) rs2032655; 14100595
M205 J2b1 Underhill et al (2001); Butler (2003); Semino et al (2004); Sengupta et al (2006); Karafet et al (2008) rs2032657; 14096903
M206 A2 Underhill et al (2001); Semino et al (2002); YCC (2002); Butler (2003); Jobling et al (2003); Karafet et al (2008) rs2032656; 14096856
M207 R aka UTY2; Underhill et al (2001); Cruciani et al (2002); YCC (2002); Butler (2003); Jobling et al (2003); Kivisild et al (2003); Cinnioglu et al (2004); Deng et al (2004); Shen et al (2004); Vallone et al (2004); Alonso et al (2005); Hammer et al (2005); Hammer et al (2006); Sengupta et al (2006); Karafet et al (2008); King et al (2008) rs2032658; 14091377
M208 C2a Underhill et al (2001); Butler (2003); Jobling et al (2003); Kayser et al (2003); Deng et al (2004); Kayser et al (2006); Scheinfeldt et al (2006); Karafet et al (2008) rs2032659; 14085597
M209 O3a3b1 Underhill et al (2001); Butler (2003); Deng et al (2004); Shi et al (2005); Karafet et al (2008) rs2032661; 14085184
M210 C4a Underhill et al (2001); Butler (2003); Jobling et al (2003); Kivisild et al (2003); Deng et al (2004); Karafet et al (2008) rs2032660; 14085174
M211 B2b4b Underhill et al (2001); Cruciani et al (2002); YCC (2002); Butler (2003); Jobling et al (2003); Karafet et al (2008) rs2032663; 14054008
M212 A2 Underhill et al (2001); Semino et al (2002); Butler (2003); Jobling et al (2003); Karafet et al (2008) rs2032664; 14036089
M213 F aka P137; Underhill et al (2001); Semino et al (2002); Butler (2003); Jobling et al (2003); Kivisild et al (2003); Deng et al (2004); Shen et al (2004); Sengupta et al (2006); Karafet et al (2008); King et al (2008) rs2032665; 14036145
M214 NO Underhill et al (2001); YCC (2002); Butler (2003); Jobling et al (2003); Deng et al (2004); Rootsi (Oct 2004); Hammer et al (2005); Hammer et al (2006); Kayser et al (2006); Karafet et al (2008) rs2032674; 13981319
M215 E1b1b Underhill et al (2001); Semino et al (2002); Butler (2003); Jobling et al (2003) Cruciani et al (2004); Semino et al (2004); Shen et al (2004); Karafet et al (2008) rs2032654; 13977218
M216 C Underhill et al (2001); YCC (2002); Butler (2003); Jobling et al (2003); Cinnioglu et al (2004); Deng et al (2004); Hammer et al (2005); Sengupta et al (2006); Karafet et al (2008) rs2032666; 13946958
M217 C3 Karafet et al (2001); Underhill et al (2001); YCC (2002); Butler (2003); Jobling et al (2003); Kayser et al (2003); Kivisild et al (2003); Cinnioglu et al (2004); Deng et al (2004); Hammer et al (2005); Hammer et al (2006); Sengupta et al (2006); Karafet et al (2008) rs2032668; 13946727
M218 B2a1 Underhill et al (2001); Butler (2003); Cruciani et al (2002); Karafet et al (2008) rs2032671; 13946457
M219 A3b2 Underhill et al (2001); Cruciani et al (2002); Semino et al (2002); Butler (2003); Jobling et al (2003); Karafet et al (2008) rs2032669; 13946309
M220 A3b Underhill et al (2001); Cruciani et al (2002); YCC (2002); Butler (2003); Jobling et al (2003); Karafet et al (2008) rs2032670; 13946444
M221 J2b Underhill et al (2001); Butler (2003); Sengupta et al (2006); Karafet et al (2008) rs2032667; 13945710
M222 R1b1b2a1a2f2 aka USP9Y+3636; Sun et al (1999); Underhill et al (2001); Jobling et al (2003); Repping et al (2003); Rozen et al (2003), Sims et al (2007). rs20321; 13411808
M223 I2b1 Underhill et al (2001); Butler (2003); Cinnioglu et al (2004); Rootsi et al (2004); Athey et al (2005); Karlsson et al (2006); Sengupta et al (2006); Karafet et al (2008); King et al (2008) 20176695
M224 E1b1b1a1a Underhill et al (2001); Cruciani et al (2002); Butler (2003); Shen et al (2004); Karafet et al (2008) 20352687
M226 S1d Kayser et al (2006); Karafet et al (2008) rs9341275; 14100841
M227 I1b Rootsi et al (2004); Karafet et al (2008) rs9341274; 14100840
M228.2 R (Private SNPs) SNP discovery and data documenting the phylogenetic position were privately communicated to the ISOGG Y-DNA Working Group. 14100839
M230 S Kayser et al (2003); Hammer et al (2006); Scheinfeldt et al (2006); Karafet et al (2008) rs9341277; 13990766
M231 N Cinnioglu et al (2004); Shen et al (2004); Rootsi (Oct 2004); Sengupta et al (2006), Rootsi et al (2007); Karafet et al (2008) rs9341278; 13979118
M235 F Repping et al (2006) rs7067496; 13342014
M236 B1 Cruciani et al (2002); Karafet et al (2008) 2709696
M241 J2b2 Cinnioglu et al (2004); Shen et al (2004); Regueiro et al (2006); Sengupta et al (2006); Karafet et al (2008) rs8179022; 13527853
M242 Q Bortolini et al (2003); Cinnioglu et al (2004); Shen et al (2004); Karafet et al (2008) rs8179021; 13527976
M243 E1b1b1 SNP discovery and data documenting the phylogenetic position were privately communicated to the ISOGG Y-DNA Working Group 13528486
M253 I1 Cinnioglu et al (2004); Rootsi et al (2004); Athey et al (2005); Karlsson et al (2006); Karafet et al (2008); King et al (2008) rs9341296; 13532101
M254 S1 Kayser et al (2006); Mona et al (2007); Karafet et al (2008) rs9341297; 13532156
M258 I Rootsi et al (2004); Karafet et al (2008); King et al (2008) rs9341301; 13532758
M260 J2a4b1 Sengupta et al (2006) rs9341303; 13534900
M265 Q1a1 aka N14; Deng et al (2004); Karafet et al (2008) rs3212294; 13540044
M267 J1 Cinnioglu et al (2004); Di Giacomo et al (2004); Semino et al (2004); Shen et al (2004); Sengupta et al (2006); Myres et al (2007); Karafet et al (2008); King et al (2008) rs9341313; 21151206
M268 O2 Sengupta et al (2006) rs13447443; 21148689
M269 R1b1b2 Cruciani et al (2002); Jobling et al (2003); Kivisild et al (2003); Cinnioglu et al (2004); Shen et al (2004); Alonso et al (2005); Hammer et al (2005); McEvoy et al (2006); Moore et al (2006); Karlsson et al (2006); Sengupta et al (2006); Karafet et al (2008); King et al (2008); Cruciani et al (2010b); Balaresque et al (2010); Notes on M269 rs9786153; 21148755
M272 T Shen et al (2004); Karafet et al (2008) rs9341308; 21148163
M274 L2b Regueiro et al (2006); Karafet et al (2008) rs9341310; 21147189
M276 A2 aka P247; Karafet et al (2008) rs9341312; 21151116
M277 A2 aka P248; Karafet et al (2008) rs9341314; 21151209
M280 J2b2b Semino et al (2004); Sengupta et al (2006); Karafet et al (2008) rs13447367; 20338150
M281 E1b1b1d private=single individual in Ethiopia: Semino et al (2002); Jobling et al (2003); Cruciani et al (2004); Semino et al (2004); Karafet et al (2008) rs13447370; 20223888
M283 G2c1 private communication from Ted Kandell; United States Patent 6929911, filed by Stanford University in 2001 rs2032592; 13540779
M284 I2b1a Rootsi et al (2004); Athey et al (2005); Karafet et al (2008) 21159849-21159852
M285 G1 Cinnioglu et al (2004); Shen et al (2004); Regueiro et al (2006); Sengupta et al (2006); Karafet et al (2008) rs13447378; 21151128
M286 G2a2 Cinnioglu et al (2004); Karafet et al (2008) rs13447379; 21151187
M287 G2b Cinnioglu et al (2004); Karafet et al (2008) rs13447380; 21151158
M288 B1 Cruciani et al (2002); Karafet et al (2008) 2709694
M289 J2a4h1a1b Shen et al (2004); Sengupta et al (2006); Karafet et al (2008) rs13447368; 20338096
M290 E1b1b1c1b private=single Palestinian individual: Shen et al (2004); Karafet et al (2008) rs13447369; 20338213
M293 E1b1b1g Henn et al (2008) rs9341316; 21154327
M294 CF Shen et al (2004); Karafet et al (2008) rs9341317; 21154333
M295 L Shen et al (2004); Karafet et al (2008) rs9341318; 21154439
M296 M1 Kayser et al (2006); Karafet et al (2008) rs9341319; 21154509
M297 O2a2 private=single individual in Cambodia (unpublished); Sengupta et al (2006) rs13447345; 21156077
M299 BT Shen et al (2004); Karafet et al (2008) rs13447347; 21157894
M300 O3a5 Shi et al (2005); Karafet et al (2008) rs13447348; 21158586
M304 J Cinnioglu et al (2004); Shen et al (2004); Karafet et al (2008); King et al (2008); Zalloua et al (2008) rs13447352; 21159241
M305 A3b2 Shen et al (2004); Karafet et al (2008) rs13447353; 21159562
M306 R1 aka S1; ; Karafet et al (2008); King et al (2008); SNP discovery and data documenting the phylogenetic position were privately communicated to the Y-DNA ISOGG Working Group rs1558843; 21159971
M307.1 O1a1 aka P203.1; Karafet et al (2008) rs13447354; 21160339
M307.2 I1 aka P203.2; Rootsi et al (2004); Shen et al (2004); Karafet et al (2008) rs13447354; 21160339
M310 E1b1b1b2 SNP discovery and data documenting the phylogenetic position were privately communicated to the ISOGG Y-DNA Working Group 21161251
M314 J2b Shen et al (2004); Sengupta et al (2006); Karafet et al (2008) rs13447442; 21162467
M317 L2 Sengupta et al (2006); Karafet et al (2008) rs13447360; 21164059
M318 J2a4h1a1c Shen et al (2004); Sengupta et al (2006); Karafet et al (2008); King et al (2008) rs13447372; 21154381
M319 J2a4d Shen et al (2004); Sengupta et al (2006); Karafet et al (2008); King et al (2008) rs13447373; 13977179
M320 T1 private=single Druze individual: Shen et al (2004); Karafet et al (2008) rs13447374; 13540161
M321 J2b2c Shen et al (2004); Sengupta et al (2006); Karafet et al (2008) rs13447375; 13540272
M322 J2a4a Shen et al (2004); Sengupta et al (2006); Karafet et al (2008) rs13447376; 13979134
M323 Q1a3 Shen et al (2004); Karafet et al (2008) rs13447377; 20327106
M324 O3a Shi et al (2005); Karafet et al (2008) rs13447361; 2881786
M327 J2a4b1a Semino et al (2004); Sengupta et al (2006); Karafet et al (2008) 20363475
M329 E1b1c Semino et al (2004); Karafet et al (2008) 2935527
M333 O3a6 Shi et al (2005); Karafet et al (2008) 13356910-13356911
M334 R1a1a1g1 private=single individual in Estonia: Underhill et al (2009) 2973777
M335 R1b1c private=Cinnioglu et al (2004); Karafet et al (2008) 13535789
M339 J2a4e Cinnioglu et al (2004); Semino et al (2004); Sengupta et al (2006); Karafet et al (2008) 2941367
M340 J2a2 Cinnioglu et al (2004); Semino et al (2004); Sengupta et al (2006); Karafet et al (2008) 20338087
M342 G1 Cinnioglu et al (2004); Shen et al (2004); Karafet et al (2008) 21653330
M343 R1b Cinnioglu et al (2004); Karafet et al (2008) rs9786184; 2947824
M346 Q1a3 Sengupta et al (2006); Karafet et al (2008) 2947156
M347 C4 Karafet et al (2008) 2937479
M349 L2a Cinnioglu et al (2004); Regueiro et al (2006); Karafet et al (2008) 2953277
M353 M2 Kayser et al (2006); Karafet et al (2008) 15818661
M356 C5 Sengupta et al (2006); Karafet et al (2008) 2948203
M357 L3 Sengupta et al (2006); Karafet et al (2008) 2948252
M359.1 D2 aka P41.1; Karafet et al (2008) 13001679
M359.2 I2a2a1 aka P41.2; Cinnioglu et al (2004); Karafet et al (2008) 13001679
M365 J1b Cinnioglu et al (2004); Semino et al (2004); Karafet et al (2008) 2948678
M367 J1e1 Cinnioglu et al (2004); Semino et al (2004); Karafet et al (2008) 2948628
M368 J1e1 Cinnioglu et al (2004); Semino et al (2004); Karafet et al (2008) 2948632
M369 J1e2 Cinnioglu et al (2004); Semino et al (2004); Karafet et al (2008) 2948477
M370 H Cinnioglu et al (2004); Karafet et al (2008) 2948598
M377 G2c Regueiro et al (2006); Sengupta et al (2006); Karafet et al (2008) 13536827, This SNP is designated as i4000116 in the 23andMe datasets.
M378 Q1b Sengupta et al (2006); Karafet et al (2008) 13536901
M379 I2b1b Sengupta et al (2006); Karafet et al (2008) rs2032636; 13536923-13536924
M387 M2 Kayser et al (2006); Karafet et al (2008) 2800274
M390 J1c Semino et al (2004); Karafet et al (2008) 2948678
M405 R1b1b2a1a1 aka S21 and U106; Myres et al (2007); aka U106 in Sims et al (2007); Karafet et al (2008); Cruciani et al 2010b) rs16981293; 8856078
M406 G2a3a King et al (2008) 2809995
M407 C3d Sengupta et al (2006); Karafet et al (2008) 2810408
M410 J2a Regueiro et al (2006);10 Sengupta et al (2006); Karafet et al (2008); King et al (2008) 2811678
M412 R1b1b2a1 aka L51 and S167; SNP discovery and data documenting the phylogenetic position were privately communicated to the ISOGG Y-DNA Working Group; Myers et al (2010). rs9786140; 8562236
M415 R1b1 Myers et al (2010) rs9786194; 9230545
M417 R1a1a1 Hinds et al (2005; Underhill et al (2009) rs17316771; 8593735
M419 J2a4f Regueiro et al (2006); Sengupta et al (2006); Karafet et al (2008) 13977300-13977304
M420 R1a aka L146, Hinds et al (2005); Underhill et al (2009 rs17250535; 21882589
M423 I2a2 Underhill et al (2007b) 17605485
M427 F2 Sengupta et al (2006); Karafet et al (2008) 17601991
M428 F2 Sengupta et al (2006); Karafet et al (2008) 17601953
M429 IJ aka P125; Underhill et al (2007b); Karafet et al (2008) rs17306671; 12541334
M434 R1a1a1f Underhill et al (2009) 13447386
M436 I2b aka P214 and S33; Underhill et al (2007b); Karafet et al (2008) rs17315680; 17256887
M438 I2 aka P215 and S31; Underhill et al (2007b); Karafet et al (2008); King et al (2008) rs17307294 15148198
M448 R1a1 aka L222, Hinds et al (2005); Underhill et al (2009) rs17222202; 15029838
M449 R1a aka L145. Hinds et al (2005); Underhill et al (2009) rs17306692; 12648745
M450 I1 aka S109; Underhill et al (2007b); Karafet et al (2008) rs17316597; 7608915
M458 R1a1a1g Underhill et al (2009) 22775852
M459 R1a1 Hinds et al (2005); Underhill et al (2009) rs17316227; 6966074
M467 R1b1b2a1a1a Myres et al (2007); aka S29; also aka U198 Sims et al (2007); Karafet et al (2008) rs17222279; 15348893
M478 R1b1b1 Myres et al (2010) 15348893
M479 R2 Myres et al (2010) 19294055
M511 R1a aka L63; Hinds et al (2005); Underhill et al (2009) rs17307677; 16672228
M512 R1a1a Hinds et al (2005); Underhill et al (2009) rs17222146; 14824547
M513 R1a aka L62; Hinds et al (2005); Underhill et al (2009) rs17222573; 16400635
M514 R1a1a Hinds et al (2005); Underhill et al (2009) rs17315926; 17884688
M515 R1a1a Hinds et al (2005); Underhill et al (2009) rs17221601; 12564623
M516 R1a1 aka L120; Hinds et al (2005); Underhill et al (2009) rs17307105; 14388411
M520 R1b1b2 Myers et al (2010) rs9786486; 4506430
M521 E1b1b1a5 Battaglia et al (2008) 6882948
M522 IJK aka L16 and S138, SNP discovery and data documenting the phylogenetic position were privately communicated to the ISOGG Y-DNA Working Group; Charoni (2009. rs9786714; 7233143
M523 IJK aka L15 and S137, SNP discovery and data documenting the phylogenetic position were privately communicated to the ISOGG Y-DNA Working Group; Charoni (2009). rs9786139; 6813519
M526 MNOPS SNP discovery and data documenting the phylogenetic position were privately communicated to the Y-DNA ISOGG Working Group; Karafet (2010). rs2033003
M529 R1b1b2a1a2f aka L21 and S145, SNP discovery and data documenting the phylogenetic position were privately communicated to the ISOGG Y-DNA Working Group; Myers et al (2010)./td> rs11799226; 14163822
MEH1 A2 YCC (2002); Butler (2003); Jobling et al (2003); Karafet et al (2008) 21906644
MEH2 Q1a YCC (2002); Butler (2003); Jobling et al (2003); Karafet et al (2008) rs4252209; 4985637
MSY2.1 (MSY2a) B2b4b Bao et al (2000); YCC (2002); Butler (2003); Jobling et al (2003); Karafet et al (2008)    
MSY2.2 (MSY2b) O1 Hammer et al (2001); YCC (2002); Butler (2003); Jobling et al (2003); Hammer et al (2005); Hammer et al (2006); Karafet et al (2008)    
N1 D1a Deng et al (2004); Karafet et al (2008) rs3212291; 13360920
N2 D1a1 private=single individual in Inner Mongolia/NE China/Gansu: Deng et al (2004); Karafet et al (2008) rs3212287; 20359276
N3 D+ + = See Note on Haplogroup Page; private=single individual in Tibet/Sichuan/Yunnan: Deng et al (2004); Karafet et al (2008)    
N4 O3a3b1a private=single individual:Deng et al (2004); Karafet et al (2008) rs3212290; 20397920
N5 O3a3b1b Deng et al (2004); Karafet et al (2008) rs3212292; 13360932
N6 O+ + = See Note on Haplogroup Page; private=single individual:Deng et al (2004)    
N7 O+ + = See Note on Haplogroup Page; private=single individual:Deng et al (2004)    
N8 O+ + = See Note on Haplogroup Page; private=single individual:Deng et al (2004)    
N9 O+ + = See Note on Haplogroup Page; private=single individual:Deng et al (2004)    
N10 O+ + = See Note on Haplogroup Page; private=single individual:Deng et al (2004)    
N11 O+ + = See Note on Haplogroup Page; private=single individual:Deng et al (2004)    
N12 P aka M74, Deng et al (2004); Karafet et al (2008) rs2032635; 20349155
N14 Q1a1 aka M265, Deng et al (2004); Karafet et al (2008) rs3212294; 13540044
P1 E1b1a aka PN1; Hammer (1995); Hammer et al (1998); YCC (2002); Butler (2003); Jobling et al (2003); Behar et al (2004); Hammer et al (2005); Karafet et al (2008) 20071555
P2 E1b1 aka PN2; Hammer (1995); Hammer et al (1998); YCC (2002); Butler (2003); Jobling et al (2003); B ehar et al (2004); Cruciani et al (2004); Flores et al (2004); Semino et al (2004); Shen et al (2004); Alonso et al (2005); Hammer et al (2005); Karafet et al (2008) rs9785756; 20070219
P3 A2 aka PN3, aka M29; Hammer (1995); Hammer et al (1998); YCC (2002); Butler (2003); Jobling et al (2003); Karafet et al (2008) 20069975
P4 A2 Hammer et al (2001); YCC (2002); Butler (2003); Jobling et al (2003); Karafet et al (2008) 21907102
P5 A2 YCC (2002); Butler (2003); Jobling et al (2003); Karafet et al (2008) 20303745
P6 B2b1 Hammer et al (2001); YCC (2002); Butler (2003); Karafet et al (2008) 6828265
P7 B2b4 Hammer et al (2001); YCC (2002); Butler (2003); Jobling et al (2003); Karafet et al (2008) 23396433; 25030182; 25750996
P8 B2b4a YHammer et al (2001); CC (2002); Butler (2003); Jobling et al (2003); Karafet et al (2008) 21958753; 22456047; 22720971
P9.1 CF Hammer et al (2001); YCC (2002); Butler (2003); Jobling et al (2003); Hammer et al (2005); Karafet et al (2008) 13435843
P9.2 E1b1a7a1 Karafet et al (2008) 13435843
P12 D2a1a1 YCC (2002); Jobling et al (2003); Karafet et al (2008) 23396458; 25030206; 25750972
P14 F Hammer et al (2000); Butler (2003); Jobling et al (2003); Behar et al (2004); Hammer et al (2005); Hammer et al (2006); Karafet et al (2008) 15907992
P15 G2a Hammer et al (2000); YCC (2002); Butler (2003); Jobling et al (2003); Behar et al (2004); Cinnioglu et al (2004); Shen et al (2004); Alonso et al (2005); Hammer et al (2005); Sengupta et al (2006); Karafet et al (2008); King et al (2008) 21653414
P16 G2a1 Hammer et al (2000); YCC (2002); Butler (2003); Jobling et al (2003); Cinnioglu et al (2004); Karafet et al (2008) 19128376; 19434578
P17 This snp was withdrawn from haplogroup G by discoverer. Jobling et al (2003) P17
P18 G2a1a YCC (2002); Butler (2003); Jobling et al (2003); Behar et al (2004); Karafet et al (2008) 23396212; 25029960; 25751218
P19 I Underhill et al (1997); Hammer et al (2001); YCC (2002); Butler (2003); Jobling et al (2003); Behar et al (2004); Hammer et al (2005); Hammer et al (2006); Karafet et al (2008) 22076149 22076609 22456064; 22720987; 22976505
P20 G1a YCC (2002); Butler (2003); Jobling et al (2003); Cinnioglu et al (2004); Karafet et al (2008) 23396162; 25029910; 25751269
P21 N1c1a YCC (2002); Butler (2003); Jobling et al (2003); Karafet et al (2008) 23397415; 25031163; 25750015
P22 M1b1 aka M104; Underhill et al (2000);Hammer et al (2001)Underhill et al (2001); YCC (2002); Butler (2003); Jobling et al (2003); Kayser et al (2003); Kayser et al (2006); Karafet et al (2008) 8679592; 8680324
P25 R1b1 Hammer et al (2000); YCC (2002); Butler (2003); Jobling et al (2003); Kivisild et al (2003); Behar et al (2004); Cinnioglu et al (2004); Vallone et al (2004); Hammer et al (2005); Karafet et al (2008) Notes on P25 rs150173; 23396453; 25030201; 25750977
P27.1 P aka P207; Hammer et al (2001); YCC (2002); Butler (2003); Jobling et al (2003); Behar et al (2004); Hammer et al (2005); Hammer et al (2006); Karafet et al (2008) rs9786896; 8679538; 8680377
P27.2 O3a1 aka DYS257; Hammer et al (2001); YCC (2002); Butler (2003); Jobling et al (2003); Behar et al (2004); Hammer et al (2005); Hammer et al (2006); Karafet et al (2008) rs9786896; 8679538; 8680377
P28 A2b Hammer et al (2001); YCC (2002); Butler (2003); Jobling et al (2003); Karafet et al (2008) 20340503
P29 E YCC (2002); Butler (2003); Jobling et al (2003); Cruciani et al (2004); Karafet et al (2008) 13007215
P30 I1 YCC (2002); Jobling et al (2003); Hammer et al (2005); Karafet et al (2008) 13006761
P31 O2 Hammer et al (2001); YCC (2002); Butler (2003); Jobling et al (2003); Hammer et al (2005); Hammer et al (2006); Karafet et al (2008) 13005251
P32 B2a1a YCC (2002); Jobling et al (2003); Karafet et al (2008) 13005252
P33 C2a1 Hammer et al (2001); YCC (2002); Butler (2003); Jobling et al (2003); Hammer et al (2006); Karafet et al (2008) 23397375; 25031123; 25750056
P34 M1a Jobling et al (2003); Kayser et al (2006); Mona et al (2007); Karafet et al (2008) 22076575; 22100114; 22456098; 22976471; 22976508
P35 M1 YCC (2002); Jobling et al (2003); Karafet et al (2008) 23396647; 25030398; 25750785;
P36.1 A2 YCC (2002); Butler (2003); Jobling et al (2003); Behar et al (2004); Hammer et al (2005); Hammer et al (2006); Karafet et al (2008) 13006449
P36.2 Q1 YCC (2002); Butler (2003); Jobling et al (2003); Behar et al (2004); Hammer et al (2005); Hammer et al (2006); Karafet et al (2008) 13006449
P37.1 (P37a) D2 YCC (2002); Butler (2003); Jobling et al (2003); Hammer et al (2006); Karafet et al (2008); King et al (2008) 13001692
P37.2 (P37b) I2a YCC (2002); Jobling et al (2003); Cinnioglu et al (2004); Rootsi et al (2004); Athey et al (2005); Hammer et al (2005); Karafet et al (2008) 13001692
P38 I YCC (2002); Jobling et al (2003); Athey et al (2005); Karafet et al (2008) 12994387
P39 C3b YCC (2002); Jobling et al (2003); Hammer et al (2005); Karafet et al (2008) 12994589
P40 I1 YCC (2002); Jobling et al (2003); Karafet et al (2008) 12994402
P41.1 (P41a) D2 aka M359.1; YCC (2002); Jobling et al (2003); Hammer et al (2006); Karafet et al (2008) 13001679
P41.2 (P41b) I2a2a1 aka M359.2; YCC (2002); Jobling et al (2003); Karafet et al (2008) 13001679
P42 D2a1a YCC (2002); Jobling et al (2003); Hammer et al (2006); Karafet et al (2008) 12991739
P43 N1b Jobling et al (2003); Hammer et al (2005); Hammer et al (2006); Karafet et al (2008) 20340361
P44 C3 YCC (2002); Butler (2003); Jobling et al (2003); Karafet et al (2008) 13005259
P45 E2b1a1 FTDNA 2005 Tree; Karafet et al (2008) 20340136
P46 E1b1a FTDNA 2005 Tree; Karafet et al (2008) 20340240
P47 D3a Hammer et al (2006); Karafet et al (2008) 13007176
P48 See Corrections
/Additions		 FTDNA 2005 Tree; Karafet et al (2008) 13006660
P49 O2b Hammer et al (2006); Karafet et al (2008) 13006415
P50 B2a1a Karafet et al (2008) 13005250
P51 M1a1 FTDNA 2005 Tree; Karafet et al (2008) 13002050
P53.1 (P53a) C3e Karafet et al (2008) 13001657
P53.2 (P53b) D2a1b1 FTDNA 2005 Tree; Karafet et al (2008) 13001657
P54 C2a2 Karafet et al (2008) 13001667
P55 C6 Karafet et al (2008) 12998960
P56 J1d Karafet et al (2008) 12997346
P57 S1a FTDNA 2005 Tree; Karafet et al (2008) 12997074
P58 J1c3 Karafet et al (2008) rs34043621; 12996675
P59 E1b1a8a2 Karafet et al (2008) 12994545
P60 K2 FTDNA 2005 Tree; Karafet et al (2008) 12994479
P61 S1b FTDNA 2005 Tree; Karafet et al (2008) 12992202
P62 C3f Karafet et al (2008) 20303337-20303338
P63 N1b1 FTDNA 2005 Tree; Karafet et al (2008) 20303216
P65 E1b1b1a2b Karafet et al (2008) 23396514; 25030262; 25750916
P66 R1b1b2a1a2f3 private; FTDNA 2005 Tree; Karafet et al (2008) 23396573; 25030321; 25750857
P67 N1c1b Karafet et al (2008) 23396610; 25030358; 25750820
P68 E2 Karafet et al (2008) 13435749
P69 P Karafet et al (2008) rs7892898; 13435814
P70 B2b4a Karafet et al (2008) 20071656
P71 A3b1a Karafet et al (2008) 20071466
P72 E1b1b1f Karafet et al (2008) 20070241
P73 M1 aka M5, Underhill et al (1997); Underhill et al (2000); Hammer et al (2001);Kayser et al (2001); Underhill et al (2001); YCC (2002); Butler (2003); Jobling et al (2003); Hammer et al (2006); Karafet et al (2008) rs3896; 20069334
P75 E1b2 FTDNA 2005 Tree; Karafet et al (2008) 20340386
P76 G1b Karafet et al (2008) 20340415
P77 T2a1 Karafet et al (2008) 13435596
P78 I2b1c FTDNA 2005 Tree; Scheinfeldt et al (2006); Karafet et al (2008) 6800387
P79 K3 FTDNA 2005 Tree; Karafet et al (2008) 6800377
P80 H2a Karafet et al (2008) 6799899
P81 J2a4g Karafet et al (2008) 6799856
P82 A1a Karafet et al (2008) 6799826
P83 S1c Karafet et al (2008) 6799772
P84 J2b2d Karafet et al (2008) 6799767
P85 B Karafet et al (2008) rs9341290; 13529972
P86 E1b1a7 aka M191; Underhill et al (2001); Cruciani et al (2002); Semino et al (2002); Butler (2003); Jobling et al (2003); Semino et al (2004); Karafet et al (2008) rs2032590; 13529007
P87 M1b FTDNA 2005 Tree; Scheinfeldt et al (2006); Karafet et al (2008) 13529113
P88 E1b1a aka M180; Underhill et al (2001); Semino et al (2002); Butler (2003); Jobling et al (2003); Karafet et al (2008) rs2032598; 13359735
P89.1 Q (Private SNPs) Private; Karafet et al (2008) 13359859
P89.2 R (Private SNPs) Private; SNP discovery and data documenting the phylogenetic position were privately communicated to the ISOGG Y-DNA Working Group. 13359859
P90 B Karafet et al (2008) 13359973
P91 F1 FTDNA 2005 Tree; Karafet et al (2008) 13359993
P92 C5a Karafet et al (2008) 13360247
P93 O3a Karafet et al (2008) rs34248257; 13378896
P94 M1a2 Karafet et al (2008) 13379075
P95 I2b1d FTDNA 2005 Tree; Karafet et al (2008) 13379100
P96 F3 Karafet et al (2008) 13379137
P97 A Karafet et al (2008) 13395667
P98 R1a1a1d Karafet et al (2008) 13395751
P99 D3 Karafet et al (2008) 13395780
P100 A3b1 Karafet et al (2008) 20362081
P101 O3a3c2 FTDNA 2005 Tree; Karafet et al (2008) 20362006
P102 A3b1a Karafet et al (2008) 13987411
P103 O3a4a Karafet et al (2008) 13987225
P104 F1 FTDNA 2005 Tree; Karafet et al (2008) 13987219
P105 N1c Karafet et al (2008) 13932356
P106 Q1a3a1c Karafet et al (2008) 13932316
P107 R1b1b2a1a1b private; Karafet et al (2008) 13329287
P108 A1 Karafet et al (2008) 13935641
P109 I1d1 Karafet et al (2008) 13935399
P110 E1a2 Karafet et al (2008) 13935117
P111 B2a2a Karafet et al (2008) 13935056
P112 B2c Karafet et al (2008) 20340313
P113 E1b1a7a3a Karafet et al (2008) 6800171
P114 A1b Karafet et al (2008) 13530049
P115 E1b1a7a2 Karafet et al (2008) 13378644
P116 E1b1a7a3 Karafet et al (2008) 13379084
P117 M3 FTDNA 2005 Tree; Scheinfeldt et al (2006); Karafet et al (2008) 13329087
P118 M3 Karafet et al (2008) 13529200
P119 N1c1c Karafet et al (2008) 13435650
P120 D2a3 Karafet et al (2008) 13935394
P121 C1a Karafet et al (2008) 6799857
P122 C1 Karafet et al (2008) 13360126
P123 IJ Karafet et al (2008) rs17315821; 17676255
P124 IJ Karafet et al (2008) rs17315772; 17547696
P125 IJ aka M429; Underhill et al (2007b); Karafet et al (2008) rs17306671; 12541334
P126 IJ Karafet et al (2008) rs17250163; 19685158
P127 IJ Karafet et al (2008) rs7892893; 8650752
P128 K Karafet et al (2008) rs17250121; 19296941
P129 IJ Karafet et al (2008) rs17306699; 12654593
P130 IJ Karafet et al (2008) rs17250887; 8618969
P131 K Karafet et al (2008) rs9786043; 13982257
P132 K Karafet et al (2008) rs3853054; 8739843
P133 F Karafet et al (2008) rs16980711; 10476740
P134 F Karafet et al (2008) rs9786877; 7455806
P135 F Karafet et al (2008) rs9786502; 20078244
P136 F Karafet et al (2008) rs9785908; 21450035
P137 F aka M213; Underhill et al (2001); Semino et al (2002); Butler (2003); Jobling et al (2003); Kivisild et al (2003); Deng et al (2004); Shen et al (2004); Sengupta et al (2006); Karafet et al (2008) rs2032665; 14036145
P138 F Karafet et al (2008) rs16980478; 12709284
P139 F Karafet et al (2008) rs1980459; 15416077
P140 F Karafet et al (2008) rs9786636; 15821369
P141 F Karafet et al (2008) rs9306845; 7001218
P142 F Karafet et al (2008) rs4988808; 7278079
P143 C,F Karafet et al (2008) rs4141886; 12707867
P144 DE Karafet et al (2008) rs9786431; 15520850
P145 F Karafet et al (2008) rs17842387; 8484089
P146 F Karafet et al (2008) rs16981340; 8662415
P147 E1 Karafet et al (2008) rs16980577; 19542808
P148 F Karafet et al (2008) rs16980396; 17859009
P149 F Karafet et al (2008) rs16980391; 17087870
P150 E Karafet et al (2008) rs9786893; 15355833
P151 F Karafet et al (2008) rs9786707; 8740661
P152 E Karafet et al (2008) rs9786634; 13174651
P153 DE Karafet et al (2008) rs9786479; 17070436
P154 E Karafet et al (2008) rs9786357; 18009501
P155 E Karafet et al (2008) rs9786301; 14847931
P156 E Karafet et al (2008) rs9786126; 15929411
P157 F Karafet et al (2008) rs9786095; 22769319
P158 F Karafet et al (2008) rs9785913; 16002907
P159 F Karafet et al (2008) rs9785905; 16606645
P160 F Karafet et al (2008) rs9306848; 8534189
P161 F Karafet et al (2008) rs16980495; 16687485
P162 E Karafet et al (2008) rs7067483; 6060464
P163 F Karafet et al (2008) rs4589047; 14751710
P164 O3a3b2 Karafet et al (2008) rs17316007; 12511232
P165 DE Karafet et al (2008) rs16980598; 17880310
P166 F Karafet et al (2008) rs16980499; 15765412
P167 DE Karafet et al (2008) rs9786489; 10461457
P168 E Karafet et al (2008) rs16980574; 20077971
P169 E Karafet et al (2008) rs16980548; 21327965
P170 E Karafet et al (2008) rs9786025; 13530916
P171 E Karafet et al (2008) rs17842518; 21853359
P172 E Karafet et al (2008) rs16981311; 7025215
P173 E Karafet et al (2008) rs7893107; 7055523
P174 E Karafet et al (2008) rs16980360; 14318720
P175 E Karafet et al (2008) rs9786191; 13313471
P176 E Karafet et al (2008) rs7067279; 14444918
P177 E1b Karafet et al (2008) rs16980473; 12669846
P179 E1b1 Karafet et al (2008) rs16980621; 12570308
P180 E1b1 Karafet et al (2008) rs9786035; 17110668
P181 E1b1 Karafet et al (2008) rs9785940; 15903505
P182 E1b1a Karafet et al (2008) rs16980394; 17745841
P183 DE Karafet et al (2008) rs16980749; 7392132
P184 C Karafet et al (2008) 7278128
P186 O Karafet et al (2008) rs16981290; 7628568
P187 F Karafet et al (2008) rs17174528; 9168252
P188 NO Karafet et al (2008) rs16980610; 22043750
P189 E1b1a Karafet et al (2008) rs9786819; 12707977
P190 D2 Karafet et al (2008) 16606643
P191 O Karafet et al (2008) rs16980601; 13924509
P192 NO Karafet et al (2008) rs16980641; 17789159
P193 NO Karafet et al (2008) rs16980426; 20673609
P194 NO Karafet et al (2008) rs16980363; 14712374
P195 NO Karafet et al (2008) rs2196155; 21074650
P196 O Karafet et al (2008) rs917759; 14263707
P197 O3a Karafet et al (2008) rs17276358; 17688857
P198 O3 Karafet et al (2008) rs17269816; 15563165
P199 O3a Karafet et al (2008) rs17269928; 17156436
P200 O3a Karafet et al (2008) rs17316592; 17069399
P201 O3a3 aka IMS-JST021354 or 021354; Nanaka et al (2007); Karafet et al (2008) rs2267801; 2888196
P202 S Karafet et al (2008) 12511024
P203.1 O1a1 aka M307.1; Karafet et al (2008) rs13447354; 21160339
P203.2 I1 aka M307.2; Rootsi et al (2004); Shen et al (2004); Karafet et al (2008) rs13447354; 21160339
P204 S Karafet et al (2008) 3605172
P205 DE aka M145; Underhill et al (2000); Underhill et al (2001); Semino et al (2002); YCC (2002); Butler (2003); Jobling et al (2003); Karafet et al (2008) rs3848982; 20176596
P207 P aka P27.1; Karafet et al (2008) rs9786896; 8679538
P209 J Karafet et al (2008) rs17315835; 17688729
P210 E2a aka M41; Underhill et al (2000); Underhill et al (2001); Cruciani et al (2002); YCC (2002); Jobling et al (2003); Karafet et al (2008) 2723889
P211 E1b1a Karafet et al (2008) 2723707
P212 I Karafet et al (2008) 3605070
P214 I2b aka M436 and S33; Underhill et al (2007b); Karafet et al (2008) rs17315680; 17256887
P215 I2 aka M438 and S31; Underhill et al (2007b); Karafet et al (2008) rs17307294; 15148198
P216 I2b aka S30; Karafet et al (2008) rs17306657; 12502338
P217 I2b aka S23; Karafet et al (2008) rs7892900; 7688484
P218 I2b aka S32; Karafet et al (2008) rs7067532; 16003024
P219 I2b1 aka S24; Karafet et al (2008) rs17221964; 14027245
P220 I2b1 aka S119; Karafet et al (2008) rs17316910; 22885057
P221 I2b1 aka S120; Karafet et al (2008) rs17316729; 8413707
P222 I2b1 aka U250 aka S118; Sims et al (2007); Karafet et al (2008) rs17315723; 17397594
P223 I2b1 aka S117; Karafet et al (2008) rs17222244; 15208728
P224 R Karafet et al (2008) rs17307398; 15795387
P225 R1 Karafet et al (2008) rs17307070; 14099736
P226 P Karafet et al (2008) rs17250992; 8905380
P227 R Karafet et al (2008) rs4481791; 19869094
P228 P Karafet et al (2008) rs17222419; 16017731
P229 R Karafet et al (2008) rs9786915; 8110994
P230 P Karafet et al (2008) rs9786781; 15979506
P231 R1 Karafet et al (2008) rs9786465; 10599615
P232 R Karafet et al (2008) rs9786261; 21444520
P233 R1 Karafet et al (2008) rs9786232; 19625746
P234 R1 Karafet et al (2008) rs9786197; 19577276
P235 P Karafet et al (2008) rs9786119; 17707606
P236 R1 Karafet et al (2008) rs9785959; 16291572
P237 P Karafet et al (2008) rs9785740; 8394875
P238 R1 Karafet et al (2008) rs9785717; 7831131
P239 P Karafet et al (2008) rs8181264; 16390624
P240 P Karafet et al (2008) rs6530605; 13108816
P241 R1 aka M173; Underhill et al (2000); Karafet et al (2001); Underhill et al (2001); Cruciani et al (2002); Semino et al (2002); YCC (2002); Butler (2003); Jobling et al (2003); Kayser et al (2003); Kivisild et al (2003); Behar et al (2004); Cinnioglu et al (2004); Flores et al (2004); Nasidze et al (2004) Alonso et al (2005); Capelli et al (2005); Hammer et al (2005); Nasidze et al (2005); Sengupta et al (2006); Karafet et al (2008) rs2032624; 13535818
P242 R1 Karafet et al (2008) rs7067478; 7707357
P243 P Karafet et al (2008) rs4141564; 8745083
P244 P Karafet et al (2008) rs2740981; 12943108
P245 R SNP discovery and data documenting the phylogenetic position were privately communicated to the ISOGG Y-DNA Working Group. rs3853052; 8693545
P247 A2 aka M276; Karafet et al (2008) rs9341312; 21151116
P248 A2 aka M277; Karafet et al (2008) rs9341314; 21151209
P249 R2a Karafet et al (2008) 8395203
P252 E1b1a7a aka U174; Sims et al (2007); Karafet et al (2008) rs16980586; 14760751
P253 E1b1a7 aka U247; Sims et al (2007); Karafet et al (2008) rs2068150; 17348769
P254 F4 Karafet et al (2008) rs35699596; 3604898
P255 C aka P325; Karafet et al (2008) 8745038
P256 M Karafet et al (2008) 8745230
P257 G Karafet et al (2008) rs2740980; 12942936
P258 E2b1a2 Karafet et al (2008) 13540552
P259 I1c Karafet et al (2008) 14100868
P260 C aka P324; Karafet et al (2008) 15795400
P261 K4 Karafet et al (2008) 12502279
P262 A2c Karafet et al (2008) 6992148
P263 K4 Karafet et al (2008) 19625357
P266 H2b Karafet et al (2008) 6799738
P267 R2a Karafet et al (2008) 16538063
P268 E1b1a9 Karafet et al (2008) 22399065
P269 E1b1a9 Karafet et al (2008) 22399066
P277 E1b1a8a Karafet et al (2008) rs16980558; 14088609
P278 E1b1a8a Karafet et al (2008) rs7067418; 8527053
P279 J2a3 Karafet et al (2008) 2941377
P280 R Karafet et al (2008) rs891407; 20302478
P281 P Karafet et al (2008) rs17315758; 17473657
P282 P Karafet et al (2008) rs17307656; 16538055
P283 P Karafet et al (2008) rs3865828; 20553879
P284 P Karafet et al (2008) rs4116821; 20531728
P285 R Karafet et al (2008) rs17249974; 17776738
P286 R1 Karafet et al (2008) rs1118473; 16225645
P287 G2 Karafet et al (2008) rs4116820; 20531485
P289 A3b Karafet et al (2008) 8527082
P291 A3b1 Karafet et al (2008) 8526988
P292 Q1a3a1c aka M320; Karafet et al (2008) rs13447374; 13540161
P293 E1b1a Karafet et al (2008) rs16981297; 8835178
P294 R1 Karafet et al (2008) rs1005041; 7630822
P295 P Karafet et al (2008) rs895530; 8023031
P297 R1b1b Karafet et al (2008) rs9785702; 17165902
P298 N1c1 SNP discovery and data documenting the phylogenetic position were privately communicated to the ISOGG Y-DNA Working Group. 20080952
P299 K3 SNP discovery and data documenting the phylogenetic position were privately communicated to the ISOGG Y-DNA Working Group. 6800377
P303 G2a3b1 aka S135; SNP discovery and data documenting the phylogenetic position were privately communicated to the ISOGG Y-DNA Working Group. 20104736
P304 K2 SNP discovery and data documenting the phylogenetic position were privately communicated to the ISOGG Y-DNA Working Group. 7295368
P307 K3 SNP discovery and data documenting the phylogenetic position were privately communicated to the ISOGG Y-DNA Working Group. 2721836
P308 K2 SNP discovery and data documenting the phylogenetic position were privately communicated to the ISOGG Y-DNA Working Group. 13918967
P309 C4 SNP discovery and data documenting the phylogenetic position were privately communicated to the ISOGG Y-DNA Working Group. 13434031-13434032
P310 R1b1b2a1a aka S129; SNP discovery and data documenting the phylogenetic position were privately communicated to the ISOGG Y-DNA Working Group. rs9786283; 17416630
P311 R1b1b2a1a aka S128; SNP discovery and data documenting the phylogenetic position were privately communicated to the ISOGG Y-DNA Working Group. rs9785659; 16758092
P312 R1b1b2a1a2 aka, S116; SNP discovery and data documenting the phylogenetic position were privately communicated to the ISOGG Y-DNA Working Group. rs34276300; 20616699
P314 H2a SNP discovery and data documenting the phylogenetic position were privately communicated to the ISOGG Y-DNA Working Group. 2948672
P324 C aka P260; Karafet et al (2008) 15795400
P325 C aka P255; Karafet et al (2008) 8745038
Page07 R1a1a1 aka PS7 or PAGES00007, Repping et al (2006), Underhill et al (2009), Rozen et al (2009). rs34297606; 13008998
Page83 P SNP discovery and data documenting the phylogenetic position were privately communicated to the ISOGG Y-DNA Working Group. rs13305774; 13407488
PK1 A (Notes) Mohyuddin et al (2006); Karafet et al (2008) 20992895
PK2 C3 Mohyuddin et al (2006); Karafet et al (2008) 21078608
PK3 L3a private=small tribal group in Pakistan; Mohyuddin et al (2006); Karafet et al (2008) 21078913
PK4 O2a1a private=small tribal group in Pakistan; Mohyuddin et al (2006); Karafet et al (2008) 19745350
PK5 R1a1a1e + = See Note on Haplogroup Page; private=two individuals with identical haplotypes in Pakistan; Mohyuddin et al (2006); Karafet et al (2008) 21717383
PN1 E1b1a aka P1; Underhill et al (2001); Semino et al (2002); Karafet et al (2008) 20071555
PN2 E1b1 aka P2; Underhill et al (2001); Cruciani et al (2002); Semino et al (2002); Shen et al (2004); Karafet et al (2008) rs9785756; 20070219
PN3 A2 aka P3, aka M29;Underhill et al (2001); Semino et al (2002); Cruciani et al (2002); Karafet et al (2008) 20069975
PS7 R1a1a1 aka Page07 or PAGES00007, Repping et al (2006), Underhill et al (2009), Rozen et al (2009). rs34297606; 13008998
RPS4Y711 C aka M130; Underhill et al (2000); Hammer et al (2001); Kayser et al (2001); Underhill et al (2001); YCC (2002); Jobling et al (2003); Kayser et al (2003); Kivisild et al (2003); Capelli et al (2005); Hammer et al (2005); Nasidze et al (2005); Hammer et al (2006); Kayser et al (2006); Repping et al (2006); Scheinfeldt et al (2006); Sengupta et al (2006); Karafet et al (2008). rs35284970; 2794854
S1 R1 aka M306; SNP discovery and data documenting the phylogenetic position were privately communicated to the Y-DNA ISOGG Working Group; Karafet et al (2008). rs1558843; 21159971
S2 IJ SNP discovery and data documenting the phylogenetic position were privately communicated to the Y-DNA ISOGG Working Group.    
S3 R1b1b2 SNP discovery and data documenting the phylogenetic position were privately communicated to the Y-DNA ISOGG Working Group. rs877756; 17228959
S4 R SNP discovery and data documenting the phylogenetic position were privately communicated to the Y-DNA ISOGG Working Group.    
S6 J SNP discovery and data documenting the phylogenetic position were privately communicated to the Y-DNA ISOGG Working Group.    
S8 R SNP discovery and data documenting the phylogenetic position were privately communicated to the Y-DNA ISOGG Working Group.    
S9 R SNP discovery and data documenting the phylogenetic position were privately communicated to the Y-DNA ISOGG Working Group.    
S10 R1b1b2 SNP discovery and data documenting the phylogenetic position were privately communicated to the Y-DNA ISOGG Working Group. rs2058276; 2728456
S13 R1b1b2 SNP discovery and data documenting the phylogenetic position were privately communicated to the Y-DNA ISOGG Working Group.    
S17 R1b1b2 SNP discovery and data documenting the phylogenetic position were privately communicated to the Y-DNA ISOGG Working Group.    
S21 R1b1b2a1a1 ala M405 and U106; SNP discovery and data documenting the phylogenetic position were privately communicated to the ISOGG Y-DNA Working Group; aka U106 in Sims et al (2007); Karafet et al (2008); also aka M405 in Myres et al (2007); Cruciani et al (2010b). rs16981293; 8856078
S22 IJ Ethnoancestry (Genealogy-DNA Rootsweb List, 30 November 2005); SNP discovery and data documenting the phylogenetic position were privately communicated to the ISOGG Y-DNA Working Group.    
S23 I2b aka P217; Ethnoancestry (Genealogy-DNA Rootsweb List, 18 November 2005); SNP discovery and data documenting the phylogenetic position were privately communicated to the ISOGG Y-DNA Working Group. rs7892900; 7688484
S24 I2b1 aka P219; Ethnoancestry (Genealogy-DNA Rootsweb List, 18 November 2005); SNP discovery and data documenting the phylogenetic position were privately communicated to the ISOGG Y-DNA Working Group. rs17221964; 14027245
S26 R1b1b2a1a1c aka L1, aka Null DYS439; SNP discovery and data documenting the phylogenetic position were privately communicated to the ISOGG Y-DNA Working Group. 13025258
S28 R1b1b2a1a2d aka U152; SNP discovery and data documenting the phylogenetic position were privately communicated to the ISOGG Y-DNA Working Group; aka U152 in Sims et al (2007); Karafet et al (2008). rs1236440; 13842543
S29 R1b1b2a1a1a aka M467 and U198; SNP discovery and data documenting the phylogenetic position were privately communicated to the ISOGG Y-DNA Working Group; aka U198 in Sims et al (2007); also aka M467in Myres et al (2007); Karafet et al (2008). rs17222279; 15348893
S30 I2b aka P216; Ethnoancestry (Genealogy-DNA Rootsweb List, 11 January 2006); SNP discovery and data documenting the phylogenetic position were privately communicated to the ISOGG Y-DNA Working Group. rs17306657; 12502338
S31 I2 aka M438 and P215; Ethnoancestry (Genealogy-DNA Rootsweb List, 11 January 2006); SNP discovery and data documenting the phylogenetic position were privately communicated to the ISOGG Y-DNA Working Group. rs17307294 15148198
S32 I2b aka P218; Ethnoancestry (Genealogy-DNA Rootsweb List, 11 January 2006); SNP discovery and data documenting the phylogenetic position were privately communicated to the ISOGG Y-DNA Working Group. rs7067532; 16003024
S33 I2b aka M436 and P214; Ethnoancestry (Genealogy-DNA Rootsweb List, 11 January 2006); SNP discovery and data documenting the phylogenetic position were privately communicated to the ISOGG Y-DNA Working Group; Underhill et al (2007b); Karafet et al (2008) rs17315680; 17256887
S34 J SNP discovery and data documenting the phylogenetic position were privately communicated to the ISOGG Y-DNA Working Group.    
S35 J SNP discovery and data documenting the phylogenetic position were privately communicated to the ISOGG Y-DNA Working Group.    
S44 R (Private SNPs) + = See Private SNPs on Haplogroup Page; SNP discovery and data documenting the phylogenetic position were privately communicated to the ISOGG Y-DNA Working Group.    
S50 R (Private SNPs) + = See Private SNPs on Haplogroup Page; SNP discovery and data documenting the phylogenetic position were privately communicated to the ISOGG Y-DNA Working Group.    
S51 J2a4b aka M67; SNP discovery and data documenting the phylogenetic position were privately communicated to the ISOGG Y-DNA Working Group; rs2032628; 20338197
S57 J2a4 aka L26;SNP discovery and data documenting the phylogenetic position were privately communicated to the ISOGG Y-DNA Working Group; rs34459399; 21352285
S62 I1 aka L121, SNP discovery and data documenting the phylogenetic position were privately communicated to the ISOGG Y-DNA Working Group; rs17222167
S63 I1 SNP discovery and data documenting the phylogenetic position were privately communicated to the ISOGG Y-DNA Working Group; rs17307252
S64 I1 aka L124, SNP discovery and data documenting the phylogenetic position were privately communicated to the ISOGG Y-DNA Working Group; rs17307586
S65 I1 aka L125, SNP discovery and data documenting the phylogenetic position were privately communicated to the ISOGG Y-DNA Working Group; rs17249791
S66 I1 SNP discovery and data documenting the phylogenetic position were privately communicated to the ISOGG Y-DNA Working Group; rs871626
S68 R1b1b2a1a2e aka L165; SNP discovery and data documenting the phylogenetic position were privately communicated to the ISOGG Y-DNA Working Group. 20389703
S69 R (Private SNPs) + = See Private SNPs on Haplogroup Page; SNP discovery and data documenting the phylogenetic position were privately communicated to the ISOGG Y-DNA Working Group.    
S79 I1e Private=One individual in Belgium; SNPs on Haplogroup Page; SNP discovery and data documenting the phylogenetic position were privately communicated to the ISOGG Y-DNA Working Group.    
S86 F+ + = See Notes on Haplogroup Page; private SNP; SNP discovery and data documenting the phylogenetic position were privately communicated to the ISOGG Y-DNA Working Group.    
S107 I1 SNP discovery and data documenting the phylogenetic position were privately communicated to the ISOGG Y-DNA Working Group. rs17250310
S108 I1 SNP discovery and data documenting the phylogenetic position were privately communicated to the ISOGG Y-DNA Working Group. rs17316192
S109 I1 aka M450; SNP discovery and data documenting the phylogenetic position were privately communicated to the ISOGG Y-DNA Working Group. rs17316597; 7608915
S110 I1 SNP discovery and data documenting the phylogenetic position were privately communicated to the ISOGG Y-DNA Working Group. rs17316639
S111 I1 SNP discovery and data documenting the phylogenetic position were privately communicated to the ISOGG Y-DNA Working Group. rs17316702
S116 R1b1b2a1a2 aka, P312; SNP discovery and data documenting the phylogenetic position were privately communicated to the ISOGG Y-DNA Working Group. rs34276300; 20616699
S117 I2b1 aka P223; Karafet et al (2008) rs17222244; 15208728
S118 I2b1 aka U250 aka P222; Sims et al (2007); Karafet et al (2008) rs17315723; 17397594
S119 I2b1 aka P220; Karafet et al (2008) rs17316910; 22885057
S120 I2b1 aka P221; Karafet et al (2008) rs17316729; 8413707
S121 R (Private SNPs) SNP discovery and data documenting the phylogenetic position were privately communicated to the ISOGG Y-DNA Working Group.    
S122 R (Private SNPs) SNP discovery and data documenting the phylogenetic position were privately communicated to the ISOGG Y-DNA Working Group.    
S123 R (Private SNPs) SNP discovery and data documenting the phylogenetic position were privately communicated to the ISOGG Y-DNA Working Group.    
S124 R (Private SNPs) SNP discovery and data documenting the phylogenetic position were privately communicated to the ISOGG Y-DNA Working Group.    
S126 G2a3 aka L30; Athey et al (2008). rs34134567; 14114293
S127 R1b1b2a1a aka L11; SNP discovery and data documenting the phylogenetic position were privately communicated to the ISOGG Y-DNA Working Group. rs9786076; 16353412
S128 R1b1b2a1a aka P311; SNP discovery and data documenting the phylogenetic position were privately communicated to the ISOGG Y-DNA Working Group. rs9785659; 16758092
S129 R1b1b2a1a aka P310; SNP discovery and data documenting the phylogenetic position were privately communicated to the ISOGG Y-DNA Working Group. rs9786283; 17416630
S130 G2a3a1 aka L14 and U16; SNP discovery and data documenting the phylogenetic position were privately communicated to the ISOGG Y-DNA Working Group; Sims et al (2009). rs35474563; 21327383
S131 G2a3b1a1a aka L13 and U13; SNP discovery and data documenting the phylogenetic position were privately communicated to the ISOGG Y-DNA Working Group; Sims et al (2009). rs9786706; 13208948
S133 G2a3a1 aka L90, SNP discovery and data documenting the phylogenetic position were privately communicated to the ISOGG Y-DNA Working Group. rs35169834; 20087688
S135 G2a3b1 aka P303, SNP discovery and data documenting the phylogenetic position were privately communicated to the ISOGG Y-DNA Working Group. 20104736
S136 R (Private SNPs) aka L50, SNP discovery and data documenting the phylogenetic position were privately communicated to the ISOGG Y-DNA Working Group. 7012023
S137 IJK aka L15 and M523, SNP discovery and data documenting the phylogenetic position were privately communicated to the ISOGG Y-DNA Working Group; Charoni (2009). rs9786139; 6813519
S138 IJK aka L16 and M522, SNP discovery and data documenting the phylogenetic position were privately communicated to the ISOGG Y-DNA Working Group; Charoni (2009). rs9786714; 7233143
S139 R1b1b2a1a2d3 aka L2, SNP discovery and data documenting the phylogenetic position were privately communicated to the ISOGG Y-DNA Working Group. rs2566671; 5815550
S141 R1b1b2a aka L23; SNP discovery and data documenting the phylogenetic position were privately communicated to the ISOGG Y-DNA Working Group. rs9785971; 6813511
S142 I1d aka L22; SNP discovery and data documenting the phylogenetic position were privately communicated to the ISOGG Y-DNA Working Group. 8636009
S144 R1b1b2a1a2d3a aka L20, SNP discovery and data documenting the phylogenetic position were privately communicated to the ISOGG Y-DNA Working Group. rs7067305; 12741292
S145 R1b1b2a1a2f aka L21 and M529, SNP discovery and data documenting the phylogenetic position were privately communicated to the ISOGG Y-DNA Working Group; Myers et al (2010). rs11799226; 14163822
S146 G2a3b1a2a aka L42; SNP discovery and data documenting the phylogenetic position were privately communicated to the ISOGG Y-DNA Working Group. rs34334142; 15170153
S147 G2a3b1a2 aka L43; SNP discovery and data documenting the phylogenetic position were privately communicated to the ISOGG Y-DNA Working Group. rs35251548; 16446759
S148 G2a3 aka L32 and U8; SNP discovery and data documenting the phylogenetic position were privately communicated to the ISOGG Y-DNA Working Group; Sims et al (2009). rs7892988; 13202247
S149 G2a aka L31; SNP discovery and data documenting the phylogenetic position were privately communicated to the ISOGG Y-DNA Working Group. rs35617575; 12538148
S154 I2b2 aka L38, SNP discovery and data documenting the phylogenetic position were privately communicated to the ISOGG Y-DNA Working Group. rs7892889; 14177464
S155 I2b2 aka L39, SNP discovery and data documenting the phylogenetic position were privately communicated to the ISOGG Y-DNA Working Group. rs7893033; 14708445
S156 I2b2 aka L40, SNP discovery and data documenting the phylogenetic position were privately communicated to the ISOGG Y-DNA Working Group. rs7893103; 14711661
S159.1 I2b2 aka L65.1, SNP discovery and data documenting the phylogenetic position were privately communicated to the ISOGG Y-DNA Working Group. rs7893015; 15136011
S159.2 J1c3d1a aka L65.2, SNP discovery and data documenting the phylogenetic position were privately communicated to the ISOGG Y-DNA Working Group. rs7893015; 15136011..15136011 (+ strand)
S162 R1b1b2a1a1d aka L48; SNP discovery and data documenting the phylogenetic position were privately communicated to the ISOGG Y-DNA Working Group. rs13303755; 22021585
S163.1(=G) IJK aka L69.1, SNP discovery and data documenting the phylogenetic position were privately communicated to the ISOGG Y-DNA Working Group. rs9786274; 14320356
S163.2(=T) I2a2a aka L69.2, SNP discovery and data documenting the phylogenetic position were privately communicated to the ISOGG Y-DNA Working Group. rs9786274; 14320356
S165 I2b1a1 aka L126; SNP discovery and data documenting the phylogenetic position were privately communicated to the ISOGG Y-DNA Working Group. rs34790845; 13411027
S166 I2b1a1 aka L137; SNP discovery and data documenting the phylogenetic position were privately communicated to the ISOGG Y-DNA Working Group. rs34441307; 10401250
S167 R1b1b2a1 aka L51 and M412; SNP discovery and data documenting the phylogenetic position were privately communicated to the ISOGG Y-DNA Working Group; Myers et al (2010). rs9786140; 8562236
S168 R1b1b2a1a2f4 aka L226; SNP discovery and data documenting the phylogenetic position were privately communicated to the ISOGG Y-DNA Working Group. 17558118
S175 R1b1b2a1a2f6 aka L144; SNP discovery and data documenting the phylogenetic position were privately communicated to the ISOGG Y-DNA Working Group. rs906842; 21120848
S176 R1b1b2a1a2f5 aka L193; SNP discovery and data documenting the phylogenetic position were privately communicated to the ISOGG Y-DNA Working Group. 6813344
S178 R1b1b2a1a2d4 aka L4; SNP discovery and data documenting the phylogenetic position were privately communicated to the ISOGG Y-DNA Working Group. 20199274
S186 R1b1b2a1a1e aka L257; SNP discovery and data documenting the phylogenetic position were privately communicated to the ISOGG Y-DNA Working Group. 14177422
SRY465 (SRY+465) O2b aka M176; Shinka et al (1999); Underhill et al (2001); Hammer et al (2001); YCC (2002); Butler (2003); Jobling et al (2003); Hammer et al (2006), Repping et al (2006); Karafet et al (2008) rs11575897; 2715180
SRY1532.1 (SRY-1532) BT aka SRY10831.1; this is a positive mutation and is designated by a plus sign; Karafet et al (2008) rs2534636; 2717176
SRY1532.2 (SRY-1532) R1a1 aka SRY10831.2; this is a back mutation and is designated by a minus sign; YCC (2002); Karafet et al (2008); King et al (2008) rs2534636; 2717176
SRY2627 (SRY-2627) R1b1b2a1a2c aka M167; Veitia et al (1997); Underhill et al (2000); Underhill et al (2001); Butler (2003); Jobling et al (2003); Flores et al (2004); Alonso et al (2005); Karafet et al (2008) rs1800865; 2718271
SRY4064 (SRY-4064) E aka SRY8299 or M40; Whitfield et al (1995); Hammer et al (1998); YCC (2002); Butler (2003); Jobling et al (2003); Behar et al (2004); Cruciani et al (2004); Semino et al (2004); Capelli et al (2005); Hammer et al (2005); Hammer et al (2006); Karafet et al (2008) rs9786608; 2723943
SRY8299 (SRY-8299) E aka SRY4064 or M40; Whitfield et al (1995); Hammer et al (1998); YCC (2002); Butler (2003); Jobling et al (2003); Behar et al (2004); Cruciani et al (2004); Semino et al (2004); Capelli et al (2005); Hammer et al (2005); Hammer et al (2006); Karafet et al (2008) rs9786608; 2723943
SRY9138 (SRY-9138) M2a aka M177; Whitfield et al (1995); Hammer et al (1998); Underhill et al (2001); YCC (2002); Butler (2003); Jobling et al (2003); Kayser et al (2006); Karafet et al (2008) 2718869
SRY10831.1 (SRY10831a) BT aka SRY1532.1; this is a positive mutation and is designated by a plus sign; Whitfield et al (1995); Hammer et al (1998); Hammer et al (2001); Cruciani et al (2002); YCC (2002); Butler (2003); Jobling et al (2003); Alonso et al (2005); Capelli et al (2005); Hammer et al (2005); Karlsson et al (2006); Karafet et al (2008) rs2534636; 2717176
SRY10831.2 (SRY10831b) R1a1 aka SRY1532; this is a back mutation and is designated by a negative sign; Hammer et al (1998); Hammer et al (2001); Cruciani et al (2002); YCC (2002); Butler (2003); Jobling et al (2003); Flores et al (2004); Alonso et al (2005); Hammer et al (2005); Karlsson et al (2006); Karafet et al (2008) rs2534636; 2717176
SY81 E1b1a aka M2 and DYS271; Capelli et al (2005); Karafet et al (2008) rs9785941; 12606577
Tat N1c aka M46; Zerjal et al (1997); Hammer et al (2001); Underhill et al (2001); YCC (2002); Butler (2003); Jobling et al (2003); Kivisild et al (2003); Flores et al (2004); Capelli et al (2005); Hammer et al (2005); Hammer et al (2006); Karlsson et al (2006); Repping et al (2006); Sengupta et al (2006); Karafet et al (2008) rs34442126; 13431977
U1 G2a3b1a1 Sims et al (2006); Sims et al (2009) rs9785956; 13568272
U2 G Sims et al (2006); Sims et al (2009) rs9786712; 13087185
U3 G Sims et al (2006); Sims et al (2009) rs11799152; 13502752
U5 G2a Sims et al (2006); Sims et al (2009) rs2178500; 22382982
U6 G Sims et al (2006); Sims et al (2009) rs2740980
U7 G Sims et al (2006); Sims et al (2009) rs7067251
U8 G2a3 aka, L32 and S148; Sims et al (2006); Sims et al (2009) rs7892988; 13202247
U12 G Sims et al (2006); Sims et al (2009) rs9786640
U13 G2a3b1a1a aka L13 and S131; Sims et al (2006); Sims et al (2009) rs9786706; 13208948
U16 G2a3a1 aka L14 and S130; Sims et al (2006); Sims et al (2009) rs35474563; 21327383
U17 G Sims et al (2006); Sims et al (2009) rs34742138
U20 G Sims et al (2006); Sims et al (2009) rs16648; 15804352
U21 G Sims et al (2006); Sims et al (2009)    
U22 G Sims et al (2006)    
U23 G Sims et al (2006); Sims et al (2009) rs9786460
U33 G Sims et al (2006); Sims et al (2009) rs1125978
U106 R1b1b2a1a1 aka M405 and S21; Myres et al (2007); Sims et al (2007); Karafet et al (2008); Cruciani et al (2010b). rs16981293; 8856078
U152 R1b1b2a1a2d aka S28; Sims et al (2007); Karafet et al (2008) rs1236440; 13842543
U174 E1b1a7a aka P252; Sims et al (2007); Karafet et al (2008) rs16980586; 14760751
U175 E1b1a8 Sims et al (2007); Karafet et al (2008) rs16980588; 14763088
U179 I Sims et al (2007); Karafet et al (2008) rs2319818; 14864102
U181 E1b1a8a1a Sims et al (2007); Karafet et al (2008) rs16980589; 14883820
U186 E1b1a7 Sims et al (2007); Karafet et al (2008) rs16980370; 14987946
U198 R1b1b2a1a1a aka S29 and M467; Sims et al (2007); also aka M467 in Myres et al (2007); Karafet et al (2008) rs17222279; 15348893
U209 E1b1a8a Sims et al (2007); Karafet et al (2008) rs16980502; 15804352
U247 E1b1a7 aka P253; Sims et al (2007); Karafet et al (2008) rs2068150; 17348769
U250 I2b1 aka P222 and S118; Sims et al (2007); Karafet et al (2008) rs17315723; 17397594
U290 E1b1a8a1 Sims et al (2007) rs16980406; 20105446
USP9Y+3178 T aka M184; Sun et al (1999); Underhill et al (2001); Butler (2003); Repping et al (2003); Rozen et al (2003); Karafet et al (2008) rs20320; 13407557
USP9Y+3636 R1b1b2a1a2f2 aka M222 rs20321; 13411808
UTY2 R aka M207 rs2032658; 14091377
V6 E1b1b1e Cruciani et al (2004); Karafet et al (2008) 6992007
V7 R1b1a3a private; Cruciani et al (2010) 6932105
V8 R1b1a2 private; Cruciani et al (2010) 6932176
V12 E1b1b1a1 Cruciani et al (2006); Karafet et al (2008) 6883099
V13 E1b1b1a2 Cruciani et al (2006); Karafet et al (2008); King et al (2008) 6902263
V19 E1b1b1a3b private=two individuals; Cruciani et al (2006); Karafet et al (2008) 20355588
V22 E1b1b1a3 Cruciani et al (2006); Karafet et al (2008) 6919957
V27 E1b1b1a2a private=single individual; Cruciani et al (2006); Karafet et al (2008) 6956051
V32 E1b1b1a1b Cruciani et al (2006); Karafet et al (2008) 6992821
V35 R1b1a3 Cruciani et al (2010) 6812012
V36 E1b1b1a2 Cruciani et al (2007); Karafet et al (2008) 6874246
V45 R Cruciani et al (2010) 15201522-15201524
V65 E1b1b1a4 Cruciani et al (2007); Karafet et al (2008) 15797262
V68 E1b1b1a Cruciani et al (2008) 16174165
V69 R1b1a4 Cruciani et al (2010) 16608448
V88 R1b1a Cruciani et al (2010a) 4862861
YAP DE aka M1; Hammer and Horai (1995); Underhill et al (2001); Cruciani et al (2002); Semino et al (2002); YCC (2002); Jobling et al (2003); Kivisild et al (2003); Cruciani et al (2004); Alonso et al (2005); Capelli et al (2005); Hammer et al (2005); Nasidze et al (2005); Karlsson et al 2006; Chandrasekar et al (2007); King et al (2008) 20070279-20071402

Additional Resources for identifying refSNP IDs
Brion et al, Introduction of a Single Nucleodite Polymorphism-based "Major Y-chromosome Haplogroup Typing Kit" Suitable for Predicting the Geographical Origin of Male Lineages. (abstract) Electrophoresis, 26:4411-4420, 2005.
Nomenclature System - Supplementary Data from the University of Arizona

Not listed in Composite List of Papers Cited
The following documents are used simply to document the citation for particular SNPs.
Family Tree DNA (FTDNA) 2005 Y-Chromosome Phylogenetic Tree. Genealogy by Genetics, Ltd., 18 October 2004.
Shen et al, Population Genetic Implications from Sequence Variation in Four Y Chromosome Genes. PNAS, Vo. 97, No. 13: 7354-7359, June 20, 2000.

Corrections/Additions made since 1 January 2010:

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