LINKS: Main Page Y-DNA Tree Trunk SNP Index Papers/Presentations Cited Glossary Listing Criteria |
CLADE/SUBCLADE SYMBOLS: Added Redefined |
SNP SYMBOLS: Not on 2010 tree Confirmed within subclade Provisional Private Investigation |
J 12f2.1,
L134, M304/Page16, P209, S6/L60, S34, S35
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J* -
� ;
J1 L255, L321, M267
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J1* -
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J1a M62
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J1b M365.1
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J1c L136
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J1c* -
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J1c1 M390
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J1c2 P56
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J1c3 P58/Page8
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J1c3* -
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J1c3a M367.1, M368.1
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J1c3b M369
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J1c3c L92, L93
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J1c3d L147.1
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J1c3d* -
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J1c3d1 L174.1
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J1c3d2 L222.2
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J1c3d2* -
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J1c3d2a L65.2/S159.2
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J2 M172/Page28, L228
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J2* -
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J2a M410, L152, L212, L559
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J2a* -
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J2a1 (not currently in use by ISOGG; M289 is within J2a4h2)
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J2a2 L581
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J2a2* -
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J2a2a P279
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J2a2a* -
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�
J2a2a1 M340
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J2a3 DYS413≤18,
L26/Page55/S57, L27
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J2a3* -
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J2a3a M47, M322
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J2a3b M67/S51
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J2a3b* -
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J2a3b1 M92, M260/Page14
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J2a3b1* -
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J2a3b1a M327
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J2a3b2 M163, M166
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J2a3b3 L210, L218, L227
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J2a3c M68
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J2a3d M319
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J2a3e M339
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J2a3f M419
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J2a3g P81
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J2a3h L24, L207.1
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J2a3h* -
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J2a3h1 M158 (location under L24 is uncertain)
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J2a3h2
L25
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J2a3h2* -
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J2a3h2a
DYS445≤7
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J2a3h2a* -
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� �
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J2a3h2a1 L70, L397, L398
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J2a3h2a1* -
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J2a3h2a1a M137
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J2a3h2a1b M289 (location under DYS445≤7 uncertain)
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J2a3h2a1c M318
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J2a3h2b L229, L230, L264
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J2a3h2c L231
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J2a3h2d L243
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J2a3h2e L254
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J2a3h2f L192.2
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J2a3h2f* --
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J2a3h2f1 L271
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J2a3h2g L270
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J2a3i L88.2, L198
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J2b M12, M102,
M221, M314, L282
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J2b* -
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J2b1 M205
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J2b2 M241
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J2b2* -
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J2b2a M99
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J2b2b M280
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J2b2c M321
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J2b2d P84
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J2b2e DYS455≤9
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J2b2f L283
Private SNPs - After having been investigated, these SNPs have not met the population distribution criteria for placement on the tree. Either too few confirmed positive testers have been found OR multiple confirmed testers were confined to either a single surname or to a small group of related males.
Caveats for the information from Karafet et al (2008):
NOTES:
Y-DNA haplogroup J evolved in the ancient Near East and was carried into North Africa, Europe, Central Asia, Pakistan and India. J2 lineages originated in the area known as the Fertile Crescent. The main spread of J2 into the Mediterranean area is thought to have coincided with the expansion of agricultural peoples during the Neolithic period. The timing of the demographic events that brought J2 to Central Asia, Pakistan, and India is not yet known. J1 lineages may have a more southern origin, as they are more often found in the Levant region, other parts of the Near East, and North Africa, with a sparse distribution in the southern Mediterranean flank of Europe, and in Ethiopia.
There is a descending gradient in the frequency of occurrence of haplogroup J from the Middle East toward the northwest of Europe, reaching about 3% of the population on the northwest Atlantic coast. The occurrence of J in Europe is undoubtedly due both to the Neolithic expansion and to episodic migrations, though the relative proportion of those two sources is controversial and may not be the same in different locations.
A significant fraction of Jews belong to haplogroup J, but Jews represent a small minority of the European members of the haplogroup. The "Cohen Modal Haplotype" is a specific set of six Y-STR marker values that occurs in both J1 and J2, though at a much higher frequency in J1.
References:
Adams et al,
The
Genetic Legacy of Religious Diversity and Intolerance: Paternal Lineages of
Christians, Jews, and Muslims in the Iberian Peninsula, American Journal of
Human Genetics, 83(6): 725-36, 2008.
Alonso et al,
The Place of the Basques in the European
Y-chromosome Diversity Landscape. (available by subscription) European Journal of
Human Genetics, 13:1293-1302, 2005.
Athey T W, Schrack B E,
A New Subclade of Y Haplogroup J2b. (pdf)
Journal of Genetic Genealogy, 4(1):27-34, 2008.
Balanovsky et al,
Parallel Evolution of Genes and Languages in the Caucasus Region.
Molecular Biology and Evolution, 13 May 2011.
Behar et al,
Contrasting Patterns of Y Chromosome Variation in Ashkenazi Jewish and Host
Non-Jewish European Populations. (pdf) Hum Genet 114:354-365, 2004.
Biro et al,
A
Y-Chromosomal Comparison of the Madjars (Kazakhstan) and the Magyars
(Hungary),
American Journal of Physical Anthropology, 139(3): 305-10, 2009. (abstract)
Capelli et al,
Population Structure in the Mediterranean Basin: A Y Chromosome Perspective. (pdf)
Annals of Human Genetics, 2005.
Cinnioglu et al,
Excavating Y-chromosome Haplotype Strata in Anatolia. (pdf) Human Genetics. 114:127-148, 2004.
Cruciani et al,
A Back Migration from Asia to Sub-Saharan Africa Is Supported
by High-Resolution Analysis of Human Y-Chromosome Haplotypes.
American Journal of Human Genetics, 70:1197-1214, 2002.
Cruciani et al,
Tracing Past Human Male
Movements in Northern/Eastern Africa and Western Eurasia: New Clues from Y-Chromosomal
Haplogroups E-M78 and J-M12. (pdf) Molecular Biology and Evolution 24(6):1300-1311, 2007.
Di Giacomo et al, Y Chromosomal Haplogroup J
as a Signature of the Post-Neolithic Colonization of Europe. (pdf) Human Genetics,
115:357-371, 2004.
El Sibai et al,
Geographical
Structure of the Y-Chromosomal Genetic Landscape of the Levant: A Coastal Inland
Contrast, Annals of Human Genetics, 73:568-81, 2009. (abstract)
Flores et al,
Reduced Genetic Structure of the Iberian Peninsula Revealed by Y-chromosome
Analysis: Implications for Population Demography. (available by subscription)
European Journal of Human Genetics,
12:855-863, 2004.
Herrera et al,
Neolithic Patrilineal Signals Indicate that the Armenian Plateau was Repopulated by Agriculturalists.
European Journal of Human Genetics, 10.1038/ejhg.2011.192, 2011.
Karafet et al,
New Binary Polymorphisms Reshape and Increase Resolution of the Human Y-Chromosomal Haplogroup
Tree. Abstract. Genome Research, published online April 2, 2008.
Supplementary Material.
Karafet et al,
Paternal Population History of East Asia: Sources, Patterns,
and Microevolutionary Processes. (pdf) American Journal of Human Genetics,
69:615-628, 2001.
King et al,
The
Coming of the Greeks to Provence and Corsica: Y-Chromosome Models of Archaic
Greek Colonization of the Western Mediterranean, BMC Evolutionary Biology, 11: 69, 2011.
King et al,
Differential Y-chromosome Anatolian Influences on the Greek and Cretan Neolithic. (abstract)
Annals of Human Genetics. 72:205�214. 2008.
Kivisild et al,
The Genetic Heritage of the Earliest Settlers Persists in Both Indian Tribal and Caste
Populations. (pdf) American Journal of Human Genetics, 72:313-332, 2003.
Myres et al, (2007),
Y-chromosome Short Tandem Repeat DYS458.2 Non-concensus Alleles Occur Independently in Both Binary
Haplogroups J1-M267 and R1b3-M405. Croatian Medical Journal, 48, 2007.
Nasidze et al,
MtDNA and Y-chromosome Variation in Kurdish Groups. (abstract) Annals of Human Genetics,
69:401-412, 2005.
Nasidze et al,
Testing
Hypotheses of Language Replacement in the Caucasus: Evidence from the
Y-chromosome, Human Genetics 112 (3): 255-61, 2003.
Regueiro et al,
Iran: Tricontinental Nexus for Y-Chromosome Driven Migration. (abstract)
Human Heredity, Vol. 61, No 3, 132-143, 2006.
Semino et al,
Ethiopians and Khoisan Share the Deepest Clades of the Human Y-Chromosome Phylogeny. (pdf)
American Journal of Human Genetics, 70:265-268, 2002.
Semino et al,
Origin, Diffusion, and Differentiation of Y-Chromosome Haplogroups E and J: Inferences on the
Neolithization of Europe and Later Migratory Events in the Mediterranean Area. (pdf) American
Journal of Human Genetics, 74:1023-1034, 2004.
Sengupta et al,
Polarity and Temporality of High Resolution Y-chromosome Distributions in India
Identify Both Indigenous and Exogenous Expansions and Reveal Minor Genetic Influence
of Central Asian Pastoralists. (pdf)
American Journal of Human Genetics, 78:202-221, 2006.
Shen et al, Reconstruction
of Patrilineages and Matrilineages of Samaritans and other Israeli Populations from Y-Chromosome
and Mitochondrial DNA Sequence Variation. (pdf) Human Mutation, 24:248-260, 2004.
Zalloua et al,
Y Chromosome Diversity in Lebanon is Structured by Recent Historical Events. (abstract)
The American Journal of Human Genetics, Volume 82, Issue 4, 873-882, 28 March 2008.
Zalloua et al,
Y Chromosome Diversity in Lebanon is Structured by Recent Historical Events. (abstract)
The American Journal of Human Genetics, Volume 82, Issue 4, 873-882, 28 March 2008.
Additional Resources:
ISOGG Wiki - What you need to know about Genetic Genealogy.
The Y-Haplogroup J DNA Project, Bonnie Schrack and Tim Janzen.
J1* Haplogroup Y-DNA Project, Peter Hrechdakian, James
Honeychuck, Paul Givargidze.
J1b (J-M365) Haplogroup Y-DNA Project, Ricardo Costa de Oliveira.
J1c3 Haplogroup Y-DNA Project, Jaber Al Haddad.
J1c3d1 (J-L222.2) Haplogroup Y-DNA Project.
J2 Haplogroup Y-DNA Project, Angela Cone.
J2 Haplogroup Arab Y-DNA Project, Kamal Al-Gazzah.
J2 Haplogroup Jewish Y-DNA Project, Debra Katz.
The J2b-M102 DNA Project, Roman Sychev.
J2b (455=8) Y-DNA Project.
J2Plus Project, Donn Devine.
J-L24 Y-DNA Project, Alfred Aberto,
Debra Katz, Tim Janzen, Kamal Al-Gazzah.
Corrections/Additions made since 1 January 2011:
Contact People for Haplogroup J: Bonnie Schrack or Tim Janzen
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