Y-DNA Haplogroup T and its Subclades - 2013
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Version History Last
revision date for this specific page: 31 December 2013
Because of continuing research, the structure of the Y-DNA Haplogroup Tree changes and ISOGG
does its best to keep the tree updated with the latest developments
in the field. The viewer may observe other versions of the tree on the Web. Email
Alice Fairhurst if the differences need
clarification or if you find any broken links on this page.
T L445, L452, L455/PF5670,
L810,
M184/Page34/USP9Y+3178, M272/PF5667, Page129
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T* -
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T1 L206,
L490, M193
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T1* -
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T1a M70/Page46/PF5662, Page78
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T1a* -
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T1a1 L162/Page21,
L299/PF5675, L453/PF5617, L454
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T1a1* -
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T1a1a L208/Page2, L905
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T1a1a* -
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T1a1a1 Z709
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T1a1a1* -
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T1a1a1a CTS8512, Z710, Z713, Z714
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T1a1a1a* -
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T1a1a1a1 CTS2860, CTS7225/L907, CTS11968,
L906, P77
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T1a1a1a1* -
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T1a1a1a1a CTS6507
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T1a1a1a1a* -
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T1a1a1a1a1 CTS9882
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T1a1a2 P321
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T1a1a2* -
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T1a1a2a P317
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T1a1a3 PF7443, PF7444, PF7445, PF7453,
PF7457, PF7458
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T1a2 L131
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T1a2* -
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T1a2a P322, P328
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T1a2b L446
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T1a3 L1255
Private SNPs are being removed from the tree and placed in the following category:
Private SNPs - After investigation these SNPs have not met the population distribution criteria for placement on the tree:
either too few confirmed positive testers have been found OR multiple confirmed testers were confined to a single surname or to a
small group of related males.
- M320 is downstream of M70. It was reported in a single Druze sample in Shen et
al (2004). Its placement relative to other SNPs under M70 is unknown. Listed 8 August 2012.
- P330 is downstream of L162. It was reported in a single Assyrian sample in Mendez
et al (2011). Its placement relative to L905 is unknown. Listed 8 August 2012.
- P327 is downstream of P322. It was reported in four closely related Palestinian
samples in Mendez et al (2011). Listed 8 August 2012.
- L1254 is downstream of L1255 and found in one branch of a Kuwaiti family.
Listed 7 October 2012.
- L447 is located downstream of L446; found in a single Armenian sample. Listed 11 January 2013.
SNPs under Investigation - Additional testing is needed to confirm adequate positive samples
and/or correct placement on the tree.
- L947 is downstream of L162. Listed 8 August 2012.
- L1364 and L1365 are at approximately P77; found in a
single WTY individual. Listed 11 January 2013.
- CTS150, CTS482/PF5596, CTS493/PF5597, CTS573, CTS2336, CTS3585/PF5618, CTS3837, CTS4014,
CTS4201/PF5621, CTS4652/PF5547, CTS5035, CTS5268/PF7471, CTS5332/PF7472, CTS5336/PF5626, CTS5364, CTS5987, CTS6004,
CTS6045/PF5629, CTS6214/PF5631, CTS6275/PF7447, CTS6276, CTS6375, CTS6577, CTS6805/PF5636, CTS6887/PF5637, CTS7164,
CTS7263, CTS7426, CTS8004/PF5641, CTS8247, CTS8397/PF5646, CTS8994, CTS9268/PF5651, CTS9308, CTS10278,
CTS10416/PF5655, CTS10700, CTS10879, CTS11054, CTS11569, CTS11746, CTS12657,
L692, L1322/PF5598, PF5518, PF5529, PF5537, PF5568, PF5587, PF5588, PF5589, PF5590, PF5592, PF5602,
PF5603, PF5604, PF5607, PF5608, PF5609, PF5610, PF5612, PF5613, PF5657, PF5659, PF5660, PF5661, PF5664,
PF5666, PF5673, PF5674, PF5678, PF7460, PF7463, PF7464, PF7465, PF7466, PF7480 and
PF7481may be equivalent to M184, L206 or M70. Listed 13 January 2013.
- CTS484, CTS550, CTS931, CTS1818, CTS2611, CTS3271, CTS4085/PF5620, CTS4916,
CTS5542/PF5627, CTS5690, CTS6000/PF7446, CTS7169/PF7448, CTS8065/PF5642, CTS9163, CTS9506/PF7450, CTS11078,
CTS11556, PF5567, PF5593, PF5594, and PF5658 may be equivalent to L162
or L208. Listed 14 January 2013.
- CTS2157, CTS11796, CTS12108 are possibly equivalent to L446. Listed 5 December 2013.
NOTES:
- Haplogroup T was formerly called K2 and was first called T in the Karafet et al (2008) paper.
- Identical SNPs that were discovered separately are listed in alphabetical order, not necessarily in
the order of discovery, and separated by "/". Examples M184/USP9Y+3178.
Y-DNA haplogroup T is found at low frequencies
throughout Europe and in parts of the Middle East, North Africa, and East Africa.
A famous person in Haplogroup T was Thomas Jefferson (1743-1826), the third President
of the United States from 1801 to 1809.
References:
Alonso et al,
The Place of the Basques in the European
Y-chromosome Diversity Landscape. (available by subscription) European Journal of
Human Genetics, 13:1293-1302, 2005.
Bortolini et al,
Y-Chromosome Evidence for Differing Ancient Demographic Histories in the Americas.
American Journal of Human Genetics, 73:524�539, (2003).
Capredon et al,
Tracing Arab-Islamic Inheritance in Madagascar: Study of the Y-chromosome and Mitochondrial DNA in the Antemoro.
PLoS ONE 8(11): e80932. doi:10.1371/journal.pone.0080932, 2013.
Cinnioglu et al,
Excavating Y-chromosome Haplotype Strata in Anatolia. (pdf) Human Genetics. 114:127-148, 2004.
Cruciani et al,
A Back Migration from Asia to Sub-Saharan Africa Is Supported
by High-Resolution Analysis of Human Y-Chromosome Haplotypes.
American Journal of Human Genetics, 70:1197-1214, 2002.
Flores et al,
Reduced Genetic Structure of the Iberian Peninsula Revealed by Y-chromosome
Analysis: Implications for Population Demography. (pdf)
European Journal of Human Genetics,
12:855-863, 2004.
Francalacci et al,
Low-Pass DNA Sequencing of 1200 Sardinians Reconstructs European Y-Chromosome Phylogeny.
Science: Vol. 341 no. 6145, pp. 565-569, DOI: 10.1126/science.1237947, 2 August 2013.
Herrera et al,
Neolithic Patrilineal Signals Indicate that the Armenian Plateau was Repopulated by Agriculturalists.
European Journal of Human Genetics, 10.1038/ejhg.2011.192, 2011.
Karafet et al,
New Binary Polymorphisms Reshape and Increase Resolution of the Human Y-Chromosomal Haplogroup
Tree. Abstract. Genome Research, published online April 2, 2008.
Supplementary Material.
Kivisild et al,
The Genetic Heritage of the Earliest Settlers Persists in Both Indian Tribal and Caste
Populations. (pdf) American Journal of Human Genetics, 72:313-332, 2003.
Mendez et al,
Increased Resolution of Y Chromosome Haplogroup T Defines Relationships among Populations of the Near East,
Europe, and Africa. Human Biology 83(1):39-53, 2011.
Regueiro et al,
Iran: Tricontinental Nexus for Y-Chromosome Driven Migration. (abstract)
Human Heredity, Vol. 61, No 3, 132-143, 2006.
Semino et al,
Ethiopians and Khoisan Share the Deepest Clades of the Human Y-Chromosome Phylogeny. (pdf)
American Journal of Human Genetics, 70:265-268, 2002.
Rozen et al,
Remarkably Little Variation in Proteins Encoded by the Y Chromosome's Single-Copy Genes, Implying Effective
Purifying Selection. American Journal of Human Genetics. 2009 December 11; 85(6): 923-928.
Sengupta et al,
Polarity and Temporality of High Resolution Y-chromosome Distributions in India
Identify Both Indigenous and Exogenous Expansions and Reveal Minor Genetic Influence
of Central Asian Pastoralists. (pdf)
American Journal of Human Genetics, 78:202-221, 2006.
Shen et al, Reconstruction
of Patrilineages and Matrilineages of Samaritans and other Israeli Populations from Y-Chromosome
and Mitochondrial DNA Sequence Variation. (pdf) Human Mutation, 24:248-260, 2004.
Su et al,
Y-chromosome Evidence for a Northward Migration of Modern Humans into Eastern Asia
during the Last Ice Age. (pdf) American Journal of Human Genetics, 65:1718-1724, 1999.
Thangaraj et al,
Genetic Affinities of the Andaman Islanders, a Vanishing Human Population. (pdf)
Current Biology, 13:86-93, 2003.
Additional Resources:
ISOGG Wiki - What you need to know about Genetic Genealogy.
The Y-DNA Haplogroup T (former K2) Project,
Gareth Henson, Peter Hrechdakian.
Haplogroup T - Walk Through the Y Project,
Paul Woods, Doyle Mathis, Gareth Henson.
Corrections/Additions made since 1 January 2013:
- Added PF5617, PF5662, PF5667, PF5670 on 4 January 2013.
- Added L1364, L1365 to Investigation, moved L447 from Investigation to Private on 11 January 2013.
- Added CTS150, CTS482, CTS493, CTS573, CTS2336, CTS3585, CTS3837, CTS4014, CTS4201, CTS4652, CTS5035,
CTS5268, CTS5332, CTS5336, CTS5364, CTS5987, CTS6004, CTS6045, CTS6214, CTS6275, CTS6276, CTS6375, CTS6577,
CTS6805, CTS6887, CTS7164, CTS7263, CTS7426, CTS8004, CTS8247, CTS8397, CTS8994, CTS9268, CTS9308, CTS10278,
CTS10416, CTS10700, CTS10879, CTS11054, CTS11569, CTS11746, CTS12657, L692, L1322/PF5598, PF5518, PF5529,
PF5537, PF5568, PF5587, PF5588, PF5589, PF5590, PF5592, PF5602, PF5603, PF5604, PF5607, PF5608, PF5609, PF5610,
PF5612, PF5613, PF5657, PF5659, PF5660, PF5661, PF5664, PF5666, PF5673, PF5674, PF5675, PF5678, PF7460, PF7463, PF7464,
PF7465, PF7466, PF7480, PF7481 to Investigation on 13 January 2013.
- Added CTS484, CTS550, CTS931, CTS1818, CTS2611, CTS3271, CTS4085, CTS4916,
CTS5542, CTS5690, CTS6000, CTS7169, CTS8065, CTS9163, CTS9506, CTS11078, CTS11556,
PF5567, PF5593, PF5594, PF5658 to Investigation on 14 January 2013.
- Added PF5547, PF5596, PF5597, PF5618, PF5621, PF5626, PF5629, PF5631, PF5636, PF5637, PF5641, PF5646, PF5651,
PF5655, PF7447, PF7471, PF7472 on 11 February 2013,
- Added CTS7225/L907, PF5620, PF5627, PF5642, PF7446, PF7448, PF7450 on 11 February 2013.
- Moved Z709 from Investigation to tree on 23 May 2013.
- Added Francalacci et al (2013) on 19 August 2013.
- Added CTS2157, CTS6507, CTS9882, CTS11796, CTS12108 to Investigation on 5 December 2013.
- Added CTS2860, CTS8512, CTS11968, PF7443, PF7444, PF7445, PF7453, PF7457, PF7458, Z710, Z713, Z714 to tree;
moved CTS6507, CTS7225/L907, CTS9882, L906 from Investigation to tree on 31 December 2013.
- Added Capredon et al on 31 December 2013.
Contact Person for Haplogroup T:
Gareth Henson
